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All Facilities >> Penn State College of Medicine >> College of Medicine Genome Sciences and Bioinformatics Facility (Genomics / Genome Analysis and Technologies)
Facility Details
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Other Facilities at this Institution:
500 University Dr. C2705
Hershey, PA 17033-2390
United Stateshttps://research.med.psu.edu/core-facilities/genome-sciences/cite this facility
Sirisha Pochareddy
Last Updated: 05/02/2024
Provides efficient and comprehensive genomic analyses.
Services are offerred outside of Penn State College of Medicine
Consulting is offerred outside of Penn State College of Medicine
Computational - Bioinformatics
Computational - High Performance Computing
Data Processing And Interpretation
Genome/Transcriptome Assembly And Annotation
Genome/Transcriptome Assembly And Annotation
Quantitative DNA Sequence Mapping
Sequencing - Capillary Sequencing
Sequencing - Next Generation Sequencing (NGS)
Agilent 2100 Bioanalyzer Instrument
This Bioanalyzer Instrument is used for sample quality control of biomolecules. [Product Link]
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Covaris E220evolution Focused-Ultrasonicator
Focused ultrasonicator that enables multi sample, batch preparation, capable of processing wide range of sample types and volumes. [Product Link]
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Fluidigm C1 Single-Cell Automated Preparation System
Automated preparation system that isolates and prepares single cell templates for analysis. It can analyze mRNA and DNA sequencing, epigenetics or miRNA expression. It can extract, reverse transcribe, amplify, and analyze gene expression. [Product Link]
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Illumina iScan System
Can scan thousands of array samples per day, without sacrificing data quality or reproducibility. [Product Link]
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Illumina MiSeq System
Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]
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Illumina NovaSeq 6000 Sequencing System
Unleashes groundbreaking innovations that leverage our technology Now you can get scalable throughput and flexibility for virtually any sequencing method, genome, and scale of project. [Product Link]
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Thermo Fisher Qubit 2.0 Fluorometer Qubit 2.0
Invitrogen Qubit Flex Fluorometer can selectively, accurately measure the concentration of up to 8 samples of DNA, RNA or protein simultaneously. Compared to single sample microvolume fluorometers, using the Qubit Flex Fluorometer for multiple samples reduces your time to data by up to 50%, with time savings beginning with batches of as few as 8 samples. Combining the one-of-a-kind Qubit Flex Fluorometer and optimized Invitrogen Qubit reagents and tube strips offers a complete solution for DNA, RNA and protein quantification. [Product Link]
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Thermo Scientific Nanodrop 1000 Spectrophotometer
The Thermo Scientific NanoDrop™ 1000 is a spectrophotometer that performs measuring of 1 ul samples with high accuracy and reproducibility. The full spectrum (220nm-750nm) spectrophotometer utilizes a patented sample retention technology that employs surface tension alone to hold the sample in place. This eliminates the need for cumbersome cuvettes and other sample containment devices and allows for clean up in seconds. In addition, the NanoDrop 1000 Spectrophotometer has the capability to measure highly concentrated samples without dilution (50X higher concentration than the samples measured by a standard cuvette spectrophotometer). [Product Link]
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10X Genomics Chromium Controller
Life Technologies QuantStudio 12k PCR System
Life Technologies QuantStudio 3D Digital PCR System
QIA Symphony DNA/RNA extraction robot
Next Advance Bullet Blender
Molecular Devices FlexStation 3
BioNano Saphyr
Oxford Nanopore MinION
Publications associated with this facility (Click To View):
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https://coremarketplace.org/?FacilityID=1162Keywords:
USEDit, genomic, epigenomic, transcriptomic, consultation, instrumentation, services, iLab, ABRF, ABRF
Resource Type:
core facility, service resource, access service resource
Citation:
Penn State College of Medicine Genome Sciences Core Facility (RRID:SCR_021123)
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