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University of Massachusetts Medical School
222 Maple Ave
Rose Gordon Bldg
Shrewsbury, MA 01545
United Stateshttp://www.umassmed.edu/nemo/Ellie Kittler
Last Updated: 10/05/2021
The Deep Sequencing Core provides a next-generation sequencing (NGS) platform for investigators using Massively Parallel Sequencing (MPS), aka Parallel Sequencing by Synthesis, or "Deep Sequencing". The core analyzes genomic DNA, DNA fractions (e.g. ChIP), cDNA, RNA, and many other library types using an Illumina HiSeq 4000 or MiSeq/MiSeq Dx. Deep Sequencing generates a large number of short overlapping sequences as well as quantifying the occurrence of each individual sequence within the library. The Deep Sequencing Core provides assistance with sample preparation (also a service offering) and bioinformatics analysis. The Core offers sequencing on a Pacific Biosciences Sequel II as well through the PacBio Core Enterprise.
Services are offerred outside of University of Massachusetts Medical School
Consulting is offerred outside of University of Massachusetts Medical School
Illumina HiSeq 3000/HiSeq 4000 Systems
Leverage patterned flow cell technology to provide rapid, high performance sequencing Perform production scale, high throughput exome or transcriptome sequencing projects quickly and economically. [Product Link]
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Illumina MiSeq System
Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]
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Illumina MiSeqDx System
FDA regulated, CE IVD marked, NGS platform for in vitro diagnostic IVD testing. [Product Link]
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Agilent 5300 Fragment Analyzer System
Fragment Analyzer System can separate up to 48 or 96 samples in parallel. [Product Link]
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Pacific BioSciences Sequel II
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https://coremarketplace.org/?FacilityID=133Keywords:
High, throughput, sequencing, library, building, service, core
Resource Type:
Resource, service resource, core facility, access service resource
Citation:
Massachusetts University Medical School Deep Sequencing Core Facility (RRID:SCR_017702)
Facility Details
About This Facility
Services and Equipment
Publications
Associations
Metadata
