The CoreMarketplace: Advanced Bioimaging Laboratory

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Advanced Bioimaging Laboratory (Microscopy (Electron, Fluorescence, Optical))

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Other Facilities at this Institution:

DDPSC Phenotyping Core Facility

DDPSC Plant Growth Facility

DDPSC Proteomics & Mass Spectrometry Facility

Plant Tissue Culture and Transformation

975 North Warson Road

Advanced Bioimaging Laboratory

Saint Louis, MO 63132

United States

https://www.danforthcenter.org/our-work/core-facilities/advanced-bioimaging-laboratory/

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Quicklinks:

https://coremarketplace.org/ABL https://coremarketplace.org/RRID:SCR_018951

Facility LIMS Page

https://secure7.ideaelan.com/Danforthcenter/Public/AppLogin.aspx

Primary Contact:

Kirk Czymmek

Last Updated: 08/04/2020

Facility RRID

RRID:SCR_018951

Facility Details

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Facility Policies

Services are offerred outside of Donald Danforth Plant Science Center

Consulting is offerred outside of Donald Danforth Plant Science Center

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Services offered:

Confocal Microscopy

Immuno Electron Microscopy

Optical Imaging

Facility Equipment

No additional equipment has been listed

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Publications

Publications associated with this facility (Click To View):

1.) Murphy KM, Johnson BS, Harmon C, Gutierrez J, Sheng H, Kenney S, Gutierrez‐Ortega K, Wickramanayake J, Fischer A, Brown A, Czymmek KJ, Bates PD, Allen DK, Gehan MA (2025 Mar 15). Excessive leaf oil modulates the plant abiotic stress response via reduced stomatal aperture in tobacco (Nicotiana tabacum) The Plant Journal, 121(6), e70067. . PMCID: 11910668.

2.) Cox KL Jr, Pardi SA, O'Connor L, Klebanovych A, Huss D, Nusinow DA, Meyers BC, Czymmek KJ (2025 Mar 6). ExPOSE: a comprehensive toolkit to perform expansion microscopy in plant protoplast systems The Plant Journal, 121(5), e70049. . PMCID: 11885898.

3.) Godwin J, Djami-Tchatchou AT, Velivelli SL, Tetorya M, Kalunke R, Pokhrel A, Zhou M, Buchko GW, Czymmek KJ, Shah DM (2024 Dec 2). Chickpea NCR13 disulfide cross-linking variants exhibit profound differences in antifungal activity and modes of action PLOS Pathogens, 20(12), e1012745. . PMCID: 11637438.

4.) Li H, Kalunke R, Tetorya M, Czymmek KJ, Shah DM (2024 Apr 15). Modes of action and potential as a peptide‐based biofungicide of a plant defensin MtDef4 Molecular Plant Pathology, 25(4), e13458. . PMCID: 11018249.

5.) Li H, Kalunke R, Tetorya M, Czymmek KJ, Shah DM (2024 Apr). Modes of action and potential as a peptide-based biofungicide of a plant defensin MtDef4. Molecular plant pathology, 25(4), e13458. . PMID: 38619888.

6.) Djami-Tchatchou AT, Tetorya M, Godwin J, Codjoe JM, Li H, Shah DM (2023 Aug 24). Small Cationic Cysteine-Rich Defensin-Derived Antifungal Peptide Controls White Mold in Soybean Journal of Fungi, 9(9), 873. . PMCID: 10532163.

7.) Bélanger S, Kramer MC, Payne HA, Hui AY, Slotkin RK, Meyers BC, Staub JM (2023 Jun 13). Plastid dsRNA transgenes trigger phased small RNA-based gene silencing of nuclear-encoded genes The Plant Cell, 35(9), 3398-3412. . PMCID: 10473229.

8.) Tetorya M, Li H, Djami‐Tchatchou AT, Buchko GW, Czymmek KJ, Shah DM (2023 Apr 10). Plant defensin MtDef4‐derived antifungal peptide with multiple modes of action and potential as a bio‐inspired fungicide Molecular Plant Pathology, 24(8), 896-913. . PMCID: 10346373.

9.) Czymmek KJ, Duncan KE, Berg H (2023 Apr). Realizing the Full Potential of Advanced Microscopy Approaches for Interrogating Plant-Microbe Interactions. Molecular plant-microbe interactions : MPMI, 36(4), 245-255. doi: 10.1094/MPMI-10-22-0208-FI. PMID: 36947723.

10.) Yu Y, Beyene G, Villmer J, Duncan KE, Hu H, Johnson T, Doust AN, Taylor NJ, Kellogg EA (2023 Feb 9). Grain shattering by cell death and fracture in Eragrostis tef Plant Physiology, 192(1), 222-239. . PMCID: 10152664.

11.) Cox KL Jr, Manchego J, Meyers BC, Czymmek KJ, Harkess A (2022 Sep 25). Automated imaging of duckweed growth and development Plant Direct, 6(9), e439. . PMCID: 9510441.

12.) Bélanger S, Berensmann H, Baena V, Duncan K, Meyers BC, Narayan K, Czymmek KJ (2022 Aug 8). A versatile enhanced freeze-substitution protocol for volume electron microscopy Frontiers in Cell and Developmental Biology, 10(), 933376. . PMCID: 9393620.

13.) Zhang N, Mattoon EM, McHargue W, Venn B, Zimmer D, Pecani K, Jeong J, Anderson CM, Chen C, Berry JC, Xia M, Tzeng SC, Becker E, Pazouki L, Evans B, Cross F, Cheng J, Czymmek KJ, Schroda M, Mühlhaus T, Zhang R (2022 May 13). Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii Communications Biology, 5(), 460. . PMCID: 9106746.

14.) Zhang N, Pazouki L, Nguyen H, Jacobshagen S, Bigge BM, Xia M, Mattoon EM, Klebanovych A, Sorkin M, Nusinow DA, Avasthi P, Czymmek KJ, Zhang R (2022 Feb 22). Comparative Phenotyping of Two Commonly Used Chlamydomonas reinhardtii Background Strains: CC-1690 (21gr) and CC-5325 (The CLiP Mutant Library Background) Plants, 11(5), 585. . PMCID: 8912731.

15.) Zhang N, Pazouki L, Nguyen H, Jacobshagen S, Bigge BM, Xia M, Mattoon EM, Klebanovych A, Sorkin M, Nusinow DA, Avasthi P, Czymmek KJ, Zhang R (2022 Feb 22). Comparative Phenotyping of Two Commonly Used Chlamydomonas reinhardtii Background Strains: CC-1690 (21gr) and CC-5325 (The CLiP Mutant Library Background). Plants (Basel, Switzerland), 11(5), . . PMID: 35270055.

16.) Duncan KE, Czymmek KJ, Jiang N, Thies AC, Topp CN (2022 Feb 4). X-ray microscopy enables multiscale high-resolution 3D imaging of plant cells, tissues, and organs. Plant physiology, 188(2), 831-845. . PMID: 34618094.

17.) Cox KL Jr, Gurazada SGR, Duncan KE, Czymmek KJ, Topp CN, Meyers BC (2022 Feb 4). Organizing your space: The potential for integrating spatial transcriptomics and 3D imaging data in plants. Plant physiology, 188(2), 703-712. . PMID: 34726737.

18.) Bai W, Ranaivoarisoa TO, Singh R, Rengasamy K, Bose A (2021 Nov 3). n-Butanol production by Rhodopseudomonas palustris TIE-1. Communications biology, 4(1), 1257. doi: 10.1038/s42003-021-02781-z. PMID: 34732832.

19.) Anderson CM, Mattoon EM, Zhang N, Becker E, McHargue W, Yang J, Patel D, Dautermann O, McAdam SA, Tarin T, Pathak S, Avenson TJ, Berry J, Braud M, Niyogi KK, Wilson M, Nusinow DA, Vargas R, Czymmek KJ, Eveland AL, Zhang R (2021 Sep 16). High light and temperature reduce photosynthetic efficiency through different mechanisms in the C4 model Setaria viridis Communications Biology, 4(), 1092. . PMCID: 8446033.

20.) Anderson CM, Mattoon EM, Zhang N, Becker E, McHargue W, Yang J, Patel D, Dautermann O, McAdam SAM, Tarin T, Pathak S, Avenson TJ, Berry J, Braud M, Niyogi KK, Wilson M, Nusinow DA, Vargas R, Czymmek KJ, Eveland AL, Zhang R (2021 Sep 16). High light and temperature reduce photosynthetic efficiency through different mechanisms in the C₄ model Setaria viridis. Communications biology, 4(1), 1092. doi: 10.1038/s42003-021-02576-2. PMID: 34531541.

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Associations

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Metadata

Links

All the links listed resolve to this core profile

https://coremarketplace.org/?FacilityID=1026
https://coremarketplace.org/RRID:SCR_018951

Institution

Institution ROR ID: https://ror.org/000cyem11

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Keywords:

Live cell imaging, Leica SP8-X, confocal microscope, flulorescent microscope, confocal image processing, transmission electron microscopy, ABRF, ABRF

Resource Type:

access service resource, core facility, service resource

Citation:

Donald Danforth Plant Science Center Advanced Bioimaging Laboratory Core Facility (RRID:SCR_018951)

Advanced Bioimaging Laboratory (Microscopy (Electron, Fluorescence, Optical))

Quicklinks:

Facility LIMS Page

Primary Contact:

Facility RRID

Facility Details

Facility Policies

(To see more facility information, click the in the upper right)

Services offered:

Facility Equipment

(To see more facility information, click the in the upper right)

Publications

(To see more facility information, click the in the upper right)

Associations

(To see more facility information, click the in the upper right)

Metadata

SciCrunch Data Imports (data maintained by https://scicrunch.org)

Facility Profile QR Code (links to this profile)

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Advanced Bioimaging Laboratory

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