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All Facilities >> Johns Hopkins University >> Center for Proteomics Discovery
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725 N. Wolfe St. Baltimore, MD 21205
WBSB 512
Baltimore, MD 21205
United Stateshttps://johnshopkins.ilab.agilent.com/service_center/show_external/6418/the_center_for_proteomics_discoverycite this facility
Chan-Hyun Na
The Center for Proteomics Discovery (CPD) at the Johns Hopkins University School of Medicine is a proteomics/metabolomics core facility that helps biomedical researchers design and execute proteomics (and metabolomics/lipidomics) studies—from sample preparation and LC-MS/MS data acquisition to protein/PTM identification and quantification and advanced bioinformatics/statistical analysis. CPD supports a wide range of workflows, including label-free (DIA/DDA) and TMT multiplexed quantitative proteomics, phosphoproteomics/other PTMs, targeted PRM, single-cell proteomics, spatial proteomics, cell-type-specific proteomics, thermal proteome profiling, and more.
Services are offerred outside of
Consulting is offerred outside of Johns Hopkins University
Last Updated: 05/03/2026
Advanced Statistical/bioinformatics Analysis (PCA, Volcano Plots, Pathway/GO, Etc.)
Cell-type-specific Proteomics (iCAB)
Consultation (experimental Design, Data Analysis)
High-resolution Mass Analysis (intact Mass, Modification Characterization)
Machine Learning Analysis For Biomarker Discovery
Monoclonal Antibody De Novo Sequencing
Protein Identification (solution, Gel Bands/spots, Complex Extracts)
Proteomics Sample Preparation (buffer Exchange, Chromatography, Digestion, Stable Isotope Labeling)
PTM Analysis (e.g., Phosphorylation, Glycosylation, Ubiquitination, Etc.)
Single-molecule Protein Sequencing (Quantvum-Si Walk-up)
Bruker timsTOF Ultra 2 mass spectrometer
Spectrometer timsTOF Ultra 2 is paired with CaptiveSpray Ultra 2 ion source for high sensitivity to work with challenging samples and detect low-abundance peptides. Used to analyze even the smallest amounts and uncover previously unseen peptides. [Product Link]
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Thermo Exploris 480 nanoLC/MS system
Exploris 480 system is hybrid quadrupole Orbitrap mass spectrometer with Waters M-Class Acquity. Proteomics system for hands on use by highly trained users. [Product Link]
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Thermo Scientific Orbitrap Fusion Lumos Tribrid Mass Spectrometer
Spectrometer performs analysis including low level PTM analysis, multiplexed relative quantitation using isobaric tags, intact protein characterization, and MSn analysis of small molecules. System incorporates the brightest ion source, segmented quadrupole mass filter with improved selectivity and ion transmission, Advanced Vacuum Technology, and ETD HD. [Product Link]
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No additional equipment has been listed
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Institution
Institution ROR ID: https://ror.org/00za53h95Keywords:
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This facility has not been assigned an RRID

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Cryo-Scanning Electron Microscopy
Negative Staining For TEM
Scanning Electron Microscopy
Serial Block Face (SBF) SEM
Transmission Electron Microscopy
Microscopy (Electron, Fluorescence, Optical)
Christine Brantner
655 W. Baltimore Street
Bressler Hall, room 7-037
Baltimore, MD 21201
RRID:SCR_027760
The Electron Microscopy Core Imaging Facility (EMCIF) is part of the Center for Innovative Biomedical Resources (CIBR) and is located on the 6th floor of Howard Hall. It is jointly sponsored by the University of Maryland School of Medicine, University of Maryland School of Dentistry, and the University of Maryland Marlene and Stewart Greenbaum Comprehensive Cancer Center.
EMCIF provides electron microscopy-related research and imaging services to all faculty and staff of the University of Maryland campus and the academic and industrial community in the Washington D.C. and Baltimore areas. All services, instrumentation, and training courses are available to anyone, academic or private users, with an interest in electron microscopy.
EMCIF services are managed by iLab core facility management program. New users must register in iLab to access instrument and EMCIF services. Follow the quick links below for iLab registration and instructions. Please contact EMCIF to inquire about our services.
This facility provides services outside its institution
This facility provides consulting outside its institution
12/09/2025
Assay Development
Cell Line Authentication
Clinical Genomics
Clinical Research
Copy Number Variation (CNV)
DNA Analysis
DNA Isolation
FFPE Na Isolation
Gene Expression Arrays
Genotyping
Micro RNA Profiling
Microarray
Nucleic Acid Extraction
Pharmacogenomic
RNA analysis
RNA Integrity
RNA Isolation
Sequencing - Capillary Sequencing
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)
TaqMan Arrays
Whole Genome Arrays
Genomics / Genome Analysis and Technologies
Nicholas Ambulos, PhD
655 West Baltimore Street
Bressler 7-037
Baltimore, MD 21201 - United States
RRID:SCR_024749
The TGL provides a wide range of genomics technologies to support basic, translational, and clinical research. TGL is a CLIA-licensed, CAP-accredited laboratory enabling support of clinical care as well as research support.
This facility provides services outside its institution
This facility provides consulting outside its institution
11/28/2023
10x Genomics
Assay Development
Assays and Measurements
BioBanking
Biorepository
Bioshipping
Bisulfite Conversion
Blood Processing
Capillary Electrophoresis
CDNA Synthesis
Cell Culture
Cell Line Authentication
Cell Lines For SARS-CoV-2 Research
Central Laboratory Supply
ChIP-Seq
Clinical Trial Support
Consultations
Copy Number Variation (CNV)
Digital PCR
DNA Analysis
DNA Isolation
FFPE Na Isolation
FFPE Restore
Gene Expression Arrays
Genomics
Genotyping
Genotyping-by-sequencing
High Content Screening
Imputation
Long Read Sequencing
Methylation Analysis
Micro RNA Profiling
Microarray
Microbiome
Molecular Library Services
Mycoplasma Detection
Nanopore Sequencing
Non - Human Genotyping
Nucleic Acid Extraction
oligo synthesis
ONT Sequencing
OpenArray
PCR Arrays
Pyrosequencing
Real-time qPCR
Repository
RNA analysis
RNA Integrity
RNA Isolation
RNAseq
Sample Preparation
Sequencing - Capillary Sequencing
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)
Sequencing - Pyrosequencing
Single-cell S
Genomics / Genome Analysis and Technologies
Barbara Daily
Johns Hopkins University
600 North Wolfe Street, Blalock 1032
Baltimore, MD 21287 - United States of America
RRID:SCR_018669
The Genetic Resources Core Facility (GRCF)
A Part of the Johns Hopkins community for more than 30 years
A JHU service center which encompasses the Core Store, BioBank & Cell Center, and DNA Services. Collectively, these groups produce a number of products and services to aid researchers in performing studies in molecular biology and genetics.
JHU BioBank & Cell Center
Facilitates CAP-accredited clinical and basic scientific research by providing expertise and service in blood and biomaterial processing, mammalian cell culture, single-cell genomics, cryogenic storage, and national/international shipping.
DNA Services
Provides solutions for all of your DNA and RNA needs. We handle basic needs like DNA isolation, plating and storage, “traditional” core services like Sanger sequencing, PCR support and genotyping, and the more complex needs presented by the constantly changing field of next-generation sequencing.
This facility provides services outside its institution
This facility provides consulting outside its institution
04/29/2026
Assay Development
Assays and Measurements
Chemiluminescence Immunoassays
Immunoassay
Multiplex Fluorescence
Radioimmunoassay
Neal Fedarko
5501 Hopkins Bayview Circle
Room 5A-64 JHAAC
Baltimore, MD 21224 - United States
https://ictr.johnshopkins.edu/service/study-conduct/cru-core-lab/
RRID:SCR_023212
Other CIDs:1S10OD032154-01
The Research Laboratory Core is a regional Service Center that performs high throughput assays for the determination of proteins, peptides, hormones and other biochemical markers in support of preclinical and clinical research studies. The laboratory has the equipment and capacity to perform standard immunoassays as well as multiplexed ELISAs. The Research Laboratory Core provides standardized sample handling that upholds high quality control by, for example, minimizing freeze/thaw cycles. The high volume of assays processed in the lab supports reduced investigator cost through batch analysis of samples and direct manufacturer pricing. Quality control is maintained by including manufacturers’ controls as well as low, medium, and high value in-house controls in each assay.
This facility provides services outside its institution
This facility provides consulting outside its institution
04/29/2026
Transgenics
Transgenics
Chip Hawkins
725 N Wolfe St
Rm 915 WBSB
Baltimore, MD 21205 - United States of America
RRID:SCR_017809
Services include:
DNA microinjection
CRISPR targeting
Sperm and Embryo Cryo
IVF
This facility provides services outside its institution
This facility provides consulting outside its institution
02/11/2025
Mass Spectrometry
RRID:SCR_025862
Core assists investigators to identify and quantify proteins and their modifications that are differentially expressed in cells, tissues or body fluids, to track interactions with binding partners during changes in signal transduction, and to identify proteolytic cleavage sites and map post-translational modifications by providing following proteomic services: Consultation, Sample preparation,Protein Identification,Protein Modifications, Protein Quantification, Targeted Quantification, High Resolution Mass Analysis,Training and Self-Service Equipment. Core offers workshops to use the Core’s MALDI-TOF mass spectrometer, Typhoon gel imaging scanner and 2D gel electrophoresis equipment and proteomic software.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/09/2024
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