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MGX (Genomics / Genome Analysis and Technologies)

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c/o IGF, 141 rue de la Cardonille

Montpellie,

34090

France

https://www.mgx.cnrs.fr

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Primary Contact:

Laurent Journot

Last Updated: 05/20/2025

Facility RRID

RRID:SCR_023091

Facility Details

MGX (Montpellier GenomiX) offers cutting-edge genomic technologies to academic laboratories and biotechnology companies.
Application portfolio includes :
Whole genome (re)sequencing, including the identification of variants (SNVs, mutations, indels, CNVs),
Targeted sequencing, for instance exomes,
Transcriptome analyses (RNA-Seq, small RNA-Seq, microarrays), including in single cells (single-cell 3’RNA-seq)
Determination of chromatin structure and dynamics (ChIP-Seq, FAIRE-Seq, Hi-C),
Epigenetic analyses (ChIP-Seq, RRBS, Bisulphite-Seq),
Genotyping (RAD-Seq, GBS, microarrays).

Facility Policies

Services are offerred outside of Montpellier GenomiX

Consulting is offerred outside of Montpellier GenomiX

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Services offered:

Custom Library Prep Service

Data Analysis And Interpretation

Data Processing And Interpretation

Digital PCR

DNA Isolation

Droplet Digital PCR

Genome/Transcriptome Assembly And Annotation

Genomics

Genotyping

Genotyping-by-sequencing

Quantitative DNA Sequence Mapping

Real-time qPCR

RNAseq

Sample Preparation

Sequencing - Capillary Sequencing

Sequencing - DNA Sequencing

Sequencing - Next Generation Sequencing (NGS)

Single-Cell Analysis

Single-cell Sequencing

Whole Exome Sequencing

Whole Genome Sequencing

Facility Equipment

No additional equipment has been listed

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Publications

Publications associated with this facility (Click To View):

1.) Pieri A, Beleggia R, Gioia T, Tong H, Di Vittori V, Frascarelli G, Bitocchi E, Nanni L, Bellucci E, Fiorani F, Pecchioni N, Marzario S, De Quattro C, Limongi AR, De Vita P, Rossato M, Schurr U, David JL, Nikoloski Z, Papa R (2024 Sep 3). Transcriptomic response to nitrogen availability reveals signatures of adaptive plasticity during tetraploid wheat domestication. The Plant cell, 36(9), 3809-3823. . PMID: 39056474.

2.) Gaucher J, Montellier E, Vial G, Chuffart F, Guellerin M, Bouyon S, Lemarie E, Botté YY, Dirani A, Ben Messaoud R, Faure MJ, Ribuot DG, Costentin C, Tamisier R, Botté CY, Khochbin S, Rousseaux S, Pépin JL (2024 Feb 16). Long-term intermittent hypoxia in mice induces inflammatory pathways implicated in sleep apnea and steatohepatitis in humans. iScience, 27(2), 108837. . PMID: 38303705.

3.) de la Fuente C, Grondin A, Sine B, Debieu M, Belin C, Hajjarpoor A, Atkinson JA, Passot S, Salson M, Orjuela J, Tranchant-Dubreuil C, Brossier JR, Steffen M, Morgado C, Dinh HN, Pandey BK, Darmau J, Champion A, Petitot AS, Barrachina C, Pratlong M, Mounier T, Nakombo-Gbassault P, Gantet P, Gangashetty P, Guedon Y, Vadez V, Reichheld JP, Bennett MJ, Kane NA, Guyomarc'h S, Wells DM, Vigouroux Y, Laplaze L (2024 Jan 31). Glutaredoxin regulation of primary root growth is associated with early drought stress tolerance in pearl millet. eLife, 12(), . . PMID: 38294329.

4.) Lebdy R, Canut M, Patouillard J, Cadoret JC, Letessier A, Ammar J, Basbous J, Urbach S, Miotto B, Constantinou A, Abou Merhi R, Ribeyre C (2023 Dec 6). The nucleolar protein GNL3 prevents resection of stalled replication forks. EMBO reports, 24(12), e57585. . PMID: 37965896.

5.) Akkawi C, Feuillard J, Diaz FL, Belkhir K, Godefroy N, Peloponese JM, Mougel M, Laine S (2023 Sep 12). Murine leukemia virus (MLV) P50 protein induces cell transformation via transcriptional regulatory function. Retrovirology, 20(1), 16. . PMID: 37700325.

6.) Boulanger M, Aqrouq M, Tempé D, Kifagi C, Ristic M, Akl D, Hallal R, Carusi A, Gabellier L, de Toledo M, Sigurdsson JO, Kaoma T, Andrieu-Soler C, Forné T, Soler E, Hicheri Y, Gueret E, Vallar L, Olsen JV, Cartron G, Piechaczyk M, Bossis G (2023 Sep 8). DeSUMOylation of chromatin-bound proteins limits the rapid transcriptional reprogramming induced by daunorubicin in acute myeloid leukemias. Nucleic acids research, 51(16), 8413-8433. . PMID: 37462077.

7.) van der Lans SPA, Janet-Maitre M, Masson FM, Walker KA, Doorduijn DJ, Janssen AB, van Schaik W, Attrée I, Rooijakkers SHM, Bardoel BW (2023 Aug 3). Colistin resistance mutations in phoQ can sensitize Klebsiella pneumoniae to IgM-mediated complement killing. Scientific reports, 13(1), 12618. . PMID: 37537263.

8.) King E, Wallner A, Guigard L, Rimbault I, Parrinello H, Klonowska A, Moulin L, Czernic P (2023 Jul 3). Paraburkholderia phytofirmans PsJN colonization of rice endosphere triggers an atypical transcriptomic response compared to rice native Burkholderia s.l. endophytes. Scientific reports, 13(1), 10696. . PMID: 37400579.

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Associations

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Metadata

Links

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https://coremarketplace.org/?FacilityID=1653
https://coremarketplace.org/RRID:SCR_023091

Institution

Institution ROR ID: https://ror.org/00ts9pr54

SciCrunch Data Imports (data maintained by https://scicrunch.org)

Keywords:

USEDit, ABRF, genomic technologies

Resource Type:

access service resource, core facility, service resource

Citation:

Montpellier GenomiX Core Facility (RRID:SCR_023091)

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Pharmacology (Analytical, Research)

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ArpegeRRID:SCR_023092

Services:

Assay Development

Assays and Measurements

Automated Liquid Handling

Pathway Interpretation

Plate Reader

Resources:

Pharmacology (Analytical, Research)

Contact Info:

Damien Maurel

c/o IGF, 141 rue de la Cardonille

Montpellier, 34090 - France

https://www.arpege.cnrs.fr

Google Maps Location

RRID:

RRID:SCR_023092

Description:

ARPEGE is specialized in the functional and structural analysis of protein complexes. This facility offers the possibility to characterize all types of molecular interactions: ligand-target binding, protein-protein interactions, signal transduction, and signalling complexes. The facility staff members are skilled specialists in luminescence-based techniques and in receptor biology.

Application portfolio:

- Analysis of cell signalling, by measuring signal transduction,
- Ligand-target binding (pharmacological analysis, affinity, selectivity),
- Protein-protein interactions (oligomerization, effectors...),
- Activation of signalling pathways (G proteins, GRK, arrestins & internalization),
- Intracellular production of second messengers (cAMP, IP1, Ca2+),
- Phosphorylation of signalling proteins (ERK, AKT...),
- Measurement of global cell functions and of different cell parameters (proliferation, migration, invasion...).

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

06/26/2023

MGX (Genomics / Genome Analysis and Technologies)

Primary Contact:

Facility RRID

Facility Details

Facility Policies

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Services offered:

Facility Equipment

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Publications

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Associations

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Metadata

SciCrunch Data Imports (data maintained by https://scicrunch.org)

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ArpegeRRID:SCR_023092

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