The CoreMarketplace: Center for Research Computing

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Center for Research Computing

Facility Details

About This Facility

Services and Equipment

Publications

Awards & Associations

Metadata

Other Facilities at this Institution:

Health Sciences Sequencing Core at UPMC Children's Hospital of Pittsburgh

Microscopy and Imaging Suite

PQI

University of Pittsburgh Dietrich School Glass Shop Core Facility

University of Pittsburgh Dietrich School Machine Shop Core Facility

University of Pittsburgh

312 Schenley Place, 4420 Bayard Street

Pittsburgh, PA 15260

United States

https://crc.pitt.edu

cite this facility

Primary Contact:

Fangping Mu

Last Updated: 12/14/2022

Facility RRID

RRID:SCR_022735

Additional Citation Identifiers

S10OD028483

Facility Details

The Center for Research Computing supports leading-edge research with free access to advanced computing hardware and software.

Facility Policies

Services are not offerred outside of University of Pittsburgh

Consulting is not offerred outside of University of Pittsburgh

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Services offered:

High Performance Computing

Facility Equipment

No additional equipment has been listed

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Publications

Publications associated with this facility (Click To View):

1.) Balcı AT, Ebeid MM, Benos PV, Kostka D, Chikina M (2023 Jun 30). An intrinsically interpretable neural network architecture for sequence-to-function learning Bioinformatics, 39(), i413-i422. . PMCID: 10311317.

2.) Wallace ML, Mentch L, Wheeler BJ, Tapia AL, Richards M, Zhou S, Yi L, Redline S, Buysse DJ (2023 Jun 19). Use and misuse of random forest variable importance metrics in medicine: demonstrations through incident stroke prediction BMC Medical Research Methodology, 23(), 144. . PMCID: 10280951.

3.) Achar SK, Bernasconi L, Johnson JK (2023 Jun 13). Machine Learning Electron Density Prediction Using Weighted Smooth Overlap of Atomic Positions Nanomaterials, 13(12), 1853. . PMCID: 10303543.

4.) Kwon H, Mpourmpakis G (2023 Jun 13). Ab Initio Thermochemistry of Highly Flexible Molecules for Thermal Decomposition Analysis Journal of Chemical Theory and Computation, 19(12), 3652-3663. . PMCID: 10308812.

5.) Mhatre CV, Wardzala JJ, Shukla PB, Agrawal M, Johnson JK (2023 Jun 2). Calculation of Self, Corrected, and Transport Diffusivities of Isopropyl Alcohol in UiO-66 Nanomaterials, 13(11), 1793. . PMCID: 10254453.

6.) Hellemann E, Durrant JD (2023 May 5). Worth the weight: Sub-Pocket EXplorer (SubPEx), a weighted-ensemble method to enhance binding-pocket conformational sampling bioRxiv, (), 2023.05.03.539330. . PMCID: 10214482.

7.) Duan B, Qiu C, Sze SH, Kaplan C (2023 Apr 4). Widespread epistasis shapes RNA Polymerase II active site function and evolution bioRxiv, (), 2023.02.27.530048. . PMCID: 10002619.

8.) DeMoya RA, Forman-Rubinsky RE, Fontaine D Jr, Shin J, Watkins SC, Lo C, Tsang M (2023 Mar 31). Sin3a Associated Protein 130kDa, sap130, plays an evolutionary conserved role in zebrafish heart development bioRxiv, (), 2023.03.30.534737. . PMCID: 10081270.

9.) Li Y, Fang Y, Chang HC, Gorczyca M, Liu P, Tseng GC (2023 Mar 26). Adaptively Integrative Association between Multivariate Phenotypes and Transcriptomic Data for Complex Diseases Genes, 14(4), 798. . PMCID: 10138055.

10.) Mao W, Miller CM, Nair VD, Ge Y, Amper MA, Cappuccio A, George M, Goforth CW, Guevara K, Marjanovic N, Nudelman G, Pincas H, Ramos I, Sealfon RS, Soares‐Schanoski A, Vangeti S, Vasoya M, Weir DL, Zaslavsky E, Kim‐Schulze S, Gnjatic S, Merad M, Letizia AG, Troyanskaya OG, Sealfon SC, Chikina M (2023 Mar 15). A methylation clock model of mild SARS‐CoV‐2 infection provides insight into immune dysregulation Molecular Systems Biology, 19(5), e11361. . PMCID: 10167476.

11.) Zuppo DA, Missinato MA, Santana-Santos L, Li G, Benos PV, Tsang M (2023 Mar 14). Foxm1 regulates cardiomyocyte proliferation in adult zebrafish after cardiac injury Development (Cambridge, England), 150(6), dev201163. . PMCID: 10108034.

12.) Xue X, Zong W, Huo Z, Ketchesin KD, Scott MR, Petersen KA, Logan RW, Seney ML, McClung C, Tseng G (2023 Jan 19). DiffCircaPipeline: a framework for multifaceted characterization of differential rhythmicity Bioinformatics, 39(1), btad039. . PMCID: 9889843.

13.) Miranda O, Fan P, Qi X, Yu Z, Ying J, Wang H, Brent DA, Silverstein JC, Chen Y, Wang L (2022 Mar 24). DeepBiomarker: Identifying Important Lab Tests from Electronic Medical Records for the Prediction of Suicide-Related Events among PTSD Patients. Journal of personalized medicine, 12(4), . . ID: 35455640.

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Associations

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Metadata

Links

All the links listed resolve to this core profile

https://coremarketplace.org/?FacilityID=1544
https://coremarketplace.org/RRID:SCR_022735

Institution

Institution ROR ID: https://ror.org/01an3r305

SciCrunch Data Imports (data maintained by https://scicrunch.org)

Keywords:

USEDit, ABRF, advanced computing hardware and software services

Resource Type:

core facility, service resource, access service resource

Citation:

University of Pittsburgh Center for Research Computing Core Facility (RRID:SCR_022735)

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Center for Research Computing

Primary Contact:

Facility RRID

Additional Citation Identifiers

Facility Details

Facility Policies

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Services offered:

Facility Equipment

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Publications

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Associations

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Metadata

SciCrunch Data Imports (data maintained by https://scicrunch.org)

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