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All Facilities >> University of South Dakota >> SD-BRIN Proteomics Core Facility
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414 E Clark St, Lee Med Bldg. Room 127
Vermillion, SD 57069
United Stateshttp://www.usd.edu/medicine/basic-biomedical-sciences/proteomics-corecite this facility
Eduardo Callegari
Last Updated: 05/19/2025
The SD BRIN/USD Proteomics Core Facility provides state-of-the-art proteomics services to researchers from South Dakota, as well as nationwide and internationally. Since 2002, the USD PCF has been providing proteomics analyses, training in the use of common instrumentation such as scanner, spot cutter, imaging software, technique, and search engine tools for protein identification. Moreover, help in resolving protocol issues, sample preparation, data analysis and visualization, grant application support and proteomics requirement to submit data to specialize per review journals. Our goal is to provide to the researchers with the capability to analyze and identify protein expression patterns in their experimental systems.
Services are offerred outside of University of South Dakota
Consulting is offerred outside of University of South Dakota
Computational - Bioinformatics
Data Analysis And Interpretation
Data Processing And Interpretation
Label Free Quantitative Proteomics
Mass Spectrometry - Proteins And Peptides
Thermo Q Exactive Plus Hybrid Quadrupole-Orbitrap Mass Spectrometer
Q Exactive Plus Hybrid Quadrupole-Orbitrap Mass Spectrometer has increased performance and new options that enhance applications from confident DMPK qual/quan screening studies to characterization of intact monoclonal antibodies. [Product Link]
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2D-nanoAcquity UPLC (Waters), Ultimate 3000 UHPLC (Thermo Scientific), QExactive Plus mass spectrometer with enhanced resolution (Thermo Scientific),Proteome Works Spot cutter (Bio-Rad), Typhoon 9410 Multi-Image scanner (GE Healthcare), 2100 Bioanalyzer (Agilent Technologies), AKTA FPLC (GE Healthcare), MassPrep Automatic Liquid Handling System (Perkin Elmer), SpeedVac centrifuge (Thermo Scientific), and SPE system with vacuum pump and manifold (Waters). Software’s: Mascot server (license for 6 PC), and Daemon Toolbox (Matrix Science), Mascot Distiller (Matrix Science), ProteinLynx Global Server v3.03 (Waters), Proteome Discoverer, ProSight, PDQuest (Bio-Rad), Proteo IQ (PremierBiosoft), Scaffold Q+S and PTM (Proteome Software), and several open source tools.
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https://coremarketplace.org/?FacilityID=224Institution
Institution ROR ID: https://ror.org/0043h8f16Keywords:
Proteomics, protein, expression, analysis, data, experimental, design, training, service, core
Resource Type:
access service resource, core facility, service resource
Citation:
South Dakota University SD BRIN Proteomics Core Facility (RRID:SCR_017743)
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Data Analysis
DNA Analysis
Genomics
Microarray
Real-time qPCR
Sequencing - DNA Sequencing
Dr. Kathy Eyster
414 E Clark St
Vermillion, SD 57069 - United States of America
The Genomics Core Facility will continue to support DNA microarray analysis of differential gene expression, RNA and DNA analysis by the Agilent microfluidics chip reader, and real time PCR/RT-PCR. To maintain the relevance of the core, we believe that it is important to add new services to the core to enable examination of the functions of genes that have been shown to be differentially expressed by DNA microarray. To this end, the GCF is currently purchasing the Amaxa Nucleofector II transfection equipment. This technology allows transfection of DNA constructs, RNAi/siRNA/ shRNA, peptides, antibodies and other biomolecules into living eukaryotic cells. The Amaxa nucleofection system is optimized for transfection of cells that are otherwise difficult to transfect.
This facility provides services outside its institution
This facility does not consult outside its institution
11/16/2010
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