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All Facilities >> University of Rhode Island >> RI-INBRE Bioinformatics Core (Bioinformatics)
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University of Rhode Island
7 Greenhouse Road, College of Pharmacy
Kingston, RI 02881
United Stateshttps://web.uri.edu/riinbre/bioinformatics/Christopher Hemme
Last Updated: 07/02/2021
P20GM103430
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Bioinformatics involves the use of modern computational tools to generate and analyze biological information. The RI-INBRE Bioinformatics Core serves researchers throughout the state of Rhode Island, providing education and training in modern bioinformatics techniques and software use, can provide funds for software licenses, and assist with grant writing and planning. We also offer services in 3D visualization, 3D printing, and virtual/augmented reality applications.
Services are offerred outside of University of Rhode Island
Consulting is offerred outside of University of Rhode Island
Illumina MiSeq System
Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]
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Applied Biosystems 3130 Genetic Analyzer
The Applied Biosystems® 3130 (4-capillary) Genetic Analyzer is an electrophoresis device for the low to medium throughput laboratories that provides industry-leading performance and sophisticated automation capabilities. It can run a wide variety of sequencing and fragment analysis applications including microsatellite analysis, AFLP, LOH, SNP validation, and SNP screening. Maintenance time is reduced by eliminating manual syringe washing and filling with automated polymer delivery. The 3130 can increase your data quality for sequencing and fragment analysis applications – longer read length, and higher resolution with shorter run times. The 3130 can increase laboratory productivity and turnaround time by processing 96- or 384-well plates with a four-capillary array. [Product Link]
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We have access to the URI Bluewaves computing cluster and cloud resources for larger scale bioinformatics analyses.
We have a small lab with two PC's and 3 laptops used for molecular modeling (2 Spartan licenses, 2 Molecular Operating Environment licenses) and VR/AR app development (HTC Vive, HTC Cosmos, Looking Glass holodisplay, etc). We also have access to the College of Pharmacy 3D printer for printing of macromolecule structures.
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https://coremarketplace.org/?FacilityID=3Keywords:
Analysis, interpretation, nucleotide, amino acid, sequence, protein, domain, structure, service, 3D visualization, modeling, core
Resource Type:
Resource, service resource, core facility, access service resource
Citation:
Rhode Island University Bioinformatics Core Facility (RRID:SCR_017685)
Facility Details
About This Facility
Services and Equipment
Publications
Associations
Metadata
