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All Facilities >> University of Delaware >> UD Sequencing & Genotyping Center (Genomics / Genome Analysis and Technologies)
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590 Avenue 1743
Ammon-Pinizzotto Biopharmaceutical Innovation Center
Newark, DE 19713
United Stateshttp://www.udel.edu/dnasequencecite this facility
Bruce Kingham
Last Updated: 01/09/2024
The University of Delaware Sequencing and Genotyping Center (SGC) supports genomics research through our established expertise with state-of-the-art genomics technologies. Our core center is located in the Delaware Biotechnology Institute, which is an interdisciplinary research unit at the University of Delaware. The SGC provides assistance with experimental design, user training, sample and data analysis. Instrumentation housed in the SGC supports high-throughput, single-molecule, and Sanger sequencing technologies, as well as qualitative and quantitative analysis of nucleic acids.
Services are offerred outside of University of Delaware
Consulting is offerred outside of University of Delaware
Sequencing - Capillary Sequencing
Sequencing - Next Generation Sequencing (NGS)
Shared Instrumentation Oversight & Maintenance
10X Genomics Chromium Plus Genetic Analyzer
Genetic analyzer, referred to as Chromium Controller for combining large partition numbers with a diverse barcode library to generate >100,000 barcode-containing partitions. [Product Link]
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Agilent 5200 Fragment Analyzer System
Fragment Analyzer System allows you to separate 12 samples in parallel in as little as 15 minutes. [Product Link]
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Agilent Femto Pulse System
Femto Pulse System separates large molecular weight DNA fragments and detects nucleic acids into femtogram range. [Product Link]
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Formulatrix Mantis Automated Liquid Handler
Automated liquid handler with a diaphragm-based chip design that dispenses aqueous and organic solutions. It will dispense in any SBS template from 6 to 1536 well plates, and can be easily programmed to dispense to custom designs as needed. [Product Link]
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Illumina MiSeq System
Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]
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Illumina NextSeq 1000 and NextSeq 2000 Sequencing Systems
Benchtop sequencers that allow you to explore new science across variety of current and emerging applications, with higher efficiency and fewer restraints. [Product Link]
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Illumina NextSeq 550 System
With tunable output and high data quality, it provides flexible power you need for whole genome, transcriptome, and targeted resequencing plus ability to scan microarrays including Infinium MethylationEPIC BeadChip and other select BeadChips. [Product Link]
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Life Technologies QuantStudio 3 Real Time PCR System
Applied Biosystems QuantStudio 3 Real-Time PCR System is designed for users who need an , easy-to-use real-time PCR system that doesn't compromise performance and quality. The simplified Design and Analysis software is best for both first-time and experienced users. When connected to the Thermo Fisher Cloud, the QuantStudio 3 system provides access to your data wherever and whenever you want. Using OptiFlex technology (featuring 4 coupled channels and white LED) and featuring three independent Veriflex temperature zones, the QuantStudio 3 system enables improved data accuracy and sensitivity for a broad range of genomic applications. [Product Link]
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Sage Science BluePippin system
Used for DNA Size Selection for Next-Gen Sequencing, with Pulsed-Field (100bp ? 50kb).BluePippin has the DNA capabilities of the Pippin Prep, plus the extra benefit of pulsed-field electrophoresis for resolving and collecting high molecular weight DNA. For long-range genomic applications, high-pass filtering allows users to collect all fragments above a size threshold set by the user. Target sizes or ranges of sizes are entered in software, and fractions are collected in buffer. Up to 5 samples/gel cassette may be run, with no possibility of cross contamination. [Product Link]
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Illumina NextSeq 2000
Illumina NextSeq 550
Illumina MiSeq
Pacific Biosciences
PacBio Sequel IIe
Sequel
Sequel II
Sequel IIe
Agilent Fragment Analyzer
Agilent FemtoPulse
ThermoFisher Quantstudio 3
10X Chromium
ABI 3130XL
Sage Science Blue Pippin
Agilent Bioanalyzer
Qubit Fluorometer
ONT MinION
Perkin Elmer SciClone
Formulatrix Mantis
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Institution ROR ID: https://ror.org/01sbq1a82Keywords:
USEDit, genomics services, molecular biology services, , ABRF
Resource Type:
core facility, service resource, access service resource
Citation:
University of Delaware Sequencing and Genotyping Center Core Facility (RRID:SCR_012230)
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Facility Details
About This Facility
Services and Equipment
Publications
Awards & Associations
Metadata
Other Facilities at this Institution:
