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Geisel School of Medicine at Dartmouth

Location: United States

Alternate Identifiers

ROR ID:

15 Core Facilities:

15 Service Outside the Institution

12 Consult Outside the Institution

Bioinformatics

Flow Cytometry

Genomics / Genome Analysis and Technologies

Microscopy (Electron, Fluorescence, Optical)

Proteomics

Transgenics

3D Illustration

4D Image Processing Stations

3D &

ATAC-Seq

Acoustic Angiography

Affinity Purification Mass Spectrometry (APMS)

Analysis Workstations

Assays and Measurements

Bioluminsecence Imaging

Brightfield Microscope With Axial Sectioning Capability

Brightfield Microscopy

Cell Culture

Cell Imaging

Cell Sorting

Clinical Imaging - Small Animal (X-ray, Ultrasound, microCAT, MRI)

Clinical Imaging - Small Animal (luminescence/fluorescence)

Clinical Research

Clinical Trial Support

Collaborative Cross Mice

Colony Management

Computational - Bioinformatics

Computational - Biostatistics

Confocal Microscopy

Confocal/ Super Resolution Microscope

Crossing

Crosslinking Mass Spectrometry

Cryo Light Microscopy

Cryo-Electron Microscopy

Cryo-Electron Microscopy Of Vitrified Sections (CEMOVIS)

Cryo-Scanning Electron Microscopy

Cytokine Assays

DNA Analysis

DNA Isolation

Data Analysis

Data Analysis And Interpretation

Data Processing

Data Processing And Interpretation

Data Visualization

Differential Interference Contrast Microscopy

EDX

Electron Microscopy

Embryo Cryopreservation & Recovery Services

FACS Cell Sorting

Fabrication

Flow Cytometric Analysis

Flow Cytometry Data Analysis

Fluorescence Microscope With Optical Sectioning Capability

Focused Ion Beam (FIB)

Gel Band Identification

Genomics

Genotyping

Germfree Mice

High-plex Immunofluorescence

Image Aquisition

Image Processing And Analysis

Immune Monitoring

Immunoassay

Immunohistochemistry

Incucyte

Intact Protein Mass Spectrometry

Interactomics

Irradiation

Label Free Quantitative Proteomics

Laser Scanning

Live Cell Imaging

Luminex Bead Based Cytokine Assays

Luminex Services

Mass Spectrometry

Mass Spectrometry - Proteins And Peptides

Metagenomics Analysis

Methylation Analysis

MicroCT

MicroED

Microarray

Microscopy

Microstructure Characterization

Microtomy/Electron

Molecular Imaging

Multi-color Flow Cytometry

Multiplex Fluorescence

Nanopore Sequencing

Nanostring

Nanostring NCounter

Necropsy

Nucleic Acid Extraction

Nucleic Acid ExtractionBioBanking

Outreach

Post Translational Modification Analysis

Power Analysis

Protocol Development/Clinical Trial CoordinationCopy Number Variation (CNV)

Quantitative Phosphoproteomics

Quantitative Proteomics - TMT

RNA Integrity

RNA Isolation

RNA analysis

Real-time qPCR

Rederivation (Mouse)

Ribosomal Reduction

Sequencing - Capillary Sequencing

Sequencing - DNA Sequencing

Sequencing - Next Generation Sequencing (NGS)

Shared Instrumentation Oversight & MaintenanceData AnalysisClinical Assessment (Hematology, Clinical Chemistries, etc.)

Single-Cell Analysis

Single-Cell AnalysisAssay Development

Single-cell Sequencing

Single-molecule Imaging

Spatial Transcriptomics

Spectral Flow Cytometry

SpectroscopyAssay Development

Staining

Surgical Services

Targeted Peptide Quantification10x Genomics

Tissue Culture

Tissue CultureAnimal Husbandry

Tissue Embed

Tissue MicroArray

TransgenicsDNA Analysis

Whole Exome Sequencing

Whole Genome Sequencing2D &

Whole Slide ImagingMass Spectrometry

Biological Mass Spectrometry and Proteomics

Services:

Affinity Purification Mass Spectrometry (APMS)

Crosslinking Mass Spectrometry

Gel Band Identification

Intact Protein Mass Spectrometry

Interactomics

Label Free Quantitative Proteomics

Mass Spectrometry - Proteins And Peptides

Post Translational Modification Analysis

Quantitative Phosphoproteomics

Quantitative Proteomics - TMT

Targeted Peptide Quantification

Resources:

Proteomics

Contact Info:

Anna Schmoker

1 Medical Center Drive

Rubin 7

Lebanon, NH 02769

https://geiselmed.dartmouth.edu/msp/

Description:

We offer quantitative and qualitative proteomics services using LC-MS/MS technologies. Our rates include sample preparation from harvested cell pellets, elutions post-enrichment or purification, or gel bands through data acquisition, quantification, and statistical analysis.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

11/18/2024

Genomics / Molecular Biology Shared Resource (GMBSR)RRID:SCR_021293

Services:

10x Genomics

ATAC-Seq

DNA Analysis

DNA Isolation

Genomics

Genotyping

Metagenomics Analysis

Methylation Analysis

Microarray

Nanopore Sequencing

Nanostring

Nanostring NCounter

Ribosomal Reduction

RNA analysis

RNA Integrity

RNA Isolation

Sequencing - DNA Sequencing

Sequencing - Next Generation Sequencing (NGS)

Single-Cell Analysis

Single-cell Sequencing

Single-molecule Imaging

Spatial Transcriptomics

Whole Exome Sequencing

Whole Genome Sequencing

Resources:

Genomics / Genome Analysis and Technologies

Contact Info:

Fred Kolling or Christian Lytle

1 Medical Center Dr

Rubin 670

LEBANON, NH 03756 - United States

https://cancer.dartmouth.edu/scientists-researchers/molecular-biology-resource

Google Maps Location

Funding Grant Number:

NCI Cancer Center Support Grant 5P30 CA023108-41.

RRID:

RRID:SCR_021293

Other CIDs:

P30CA023108-41

Description:

Services and instrumentation that enable DNA/RNA extraction and quality control, next-generation sequencing, epigenetic profiling and microarray analysis on a whole-genome scale, from the level organisms to single cells. Sanger Sequencing and Gene Expression assays with the NanoString nCounter Max System. We care for a wide range of molecular biology related instruments available for use by individuals on a walk-up basis.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

05/30/2024

Genomic Data Sciences CoreRRID:SCR_025383

Resources:

Bioinformatics

Contact Info:

Owen Wilkins

1 Medical Center Drive

Willamson Translation Research Building

Lebanon, NH 03756 - United States of America

https://sites.dartmouth.edu/cqb/projects-and-cores/data-analytics-core/

Google Maps Location

RRID:

RRID:SCR_025383

Description:

The Genomics Data Sciences Core (GDSC) at Dartmouth offers comprehensive services to support the bioinformatic, computational, and statistical analysis of genomics data. We maintain a suite of standardized analysis pipelines for common data types like RNA-seq, ATAC-seq, and genome assembly. For more complex datasets, such as single-cell genomics, we provide tailored analysis solutions. Our team assists with all project stages, from experimental design to publication support and data management. Additionally, the GDSC hosts several multi-day bioinformatics workshops designed to introduce fundamental concepts for analysis of genomics data.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

05/28/2024

DCC-Irradiation, Imaging, Microscopy and Animal Cancer ModelsRRID:SCR_025077

Services:

2D &

3D Illustration

3D &

4D Image Processing Stations

Acoustic Angiography

Analysis Workstations

Bioluminsecence Imaging

Brightfield Microscope With Axial Sectioning Capability

Brightfield Microscopy

Cell Imaging

Clinical Imaging - Small Animal (luminescence/fluorescence)

Clinical Imaging - Small Animal (X-ray, Ultrasound, microCAT, MRI)

Collaborative Cross Mice

Colony Management

Confocal Microscopy

Confocal/ Super Resolution Microscope

Crossing

Cryo Light Microscopy

Cryo-Electron Microscopy

Cryo-Electron Microscopy Of Vitrified Sections (CEMOVIS)

Cryo-Scanning Electron Microscopy

Differential Interference Contrast Microscopy

EDX

Electron Microscopy

Fabrication

Fluorescence Microscope With Optical Sectioning Capability

Focused Ion Beam (FIB)

Germfree Mice

High-plex Immunofluorescence

Image Aquisition

Image Processing And Analysis

Incucyte

Irradiation

Laser Scanning

Live Cell Imaging

MicroCT

MicroED

Microscopy

Microstructure Characterization

Microtomy/Electron

Molecular Imaging

Multiplex Fluorescence

Resources:
Contact Info:

Radu V Stan

1 Medical Center Drive

Lebanon, NH 03756 - United States

https://cancer.dartmouth.edu/scientists-researchers/irradiation-imaging-microscopy-animal-resource

Google Maps Location

RRID:

RRID:SCR_025077

Other CIDs:

5P30CA023108

Description:

The Irradiation, Imaging, Microscopy and Animal Cancer Models Shared Resource at Dartmouth Cancer center is an integrated resource offering services in Irradiation, pre-clinical imaging of small and large animals, light and electron microscopy as well as large and small animal cancer models.

The Irradiation Section assists investigators in radiation treatment planning and delivery of ionizing irradiation to cells, rodents and large animals with engineered, transplanted or spontaneous tumors.

The Imaging Section provides technologies for non-invasive, whole-animal imaging of animals used in preclinical research studies.

The Microscopy Section provides access to point scanning confocal microscopy with Airyscan super resolution, conventional bright field and fluorescence light microscopy, high throughput live imaging, automated slide scanning and image analysis resources. The electron microscopy resource provides state of the art scanning , transmission and scanning transmission electron microscopy.

The Animal Cancer Models section supports the generation and utilization of large and small animals for modeling cancer and other human diseases. The section has expertise in generating cancer models using wild type or genetically engineered animals in immunocompetent and immunocompromised backgrounds, as well as mice with a humanized immune system.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

02/29/2024

DCC-Microscopy Shared ResourceRRID:SCR_025076

Resources:

Microscopy (Electron, Fluorescence, Optical)

Contact Info:

Radu V Stan

1 Medical Center Drive

Borwell 318W

Lebanon, NH 03756 - United States of America

https://cancer.dartmouth.edu/scientists-researchers/microscopy-resource

Google Maps Location

RRID:

RRID:SCR_025076

Other CIDs:

5P30CA023108

Description:

The facility provides state of the art imaging instrumentation and analysis software along with training and expertise to ensure their proper and efficient use. Instrumentation and technologies available to users include: (i) Zeiss LSM800 AIRYSCAN confocal microscope, a point scanning confocal system with high sensitivity GaAsP detectors allows confocal imaging of live cells, fixed cells, and tissues. It has full stage environmental control (temperature, gas and humidity) and autofocus, allowing long time lapse experiments of live cells. The Airyscan 32-detector array allows super resolution imaging. The system is integrated by Zen software allowing 3-D reconstruction, co-localization, deconvolution and image tiling. (ii) PerkinElmer / Akoya Vectra 3.0 Automated Quantitative Pathology Imaging System is a brightfield and fluorescence whole slide scanner with multi-spectral acquisition and spectral unmixing capabilities, allows highly multiplexed biomarker imaging on tissues sections and cells. (iii) Agilent/BioTek Cytation 5 with BioSpa8 live-cell microscopy system for fluorescence and phase contrast microscopy suitable for high throughput and long-term studies of cell-cell interaction, cell proliferation, survival and migration. The system enables time-lapsed images and kinetic measurements from living cells over many days with up to eigth multi-well plates imaged independently. (iv) Olympus IX-83 ZDC2 microscope equipped with a PRIMO UV light-based bioengineering device for micropatterning and microfabrication. (v) Olympus IX73 Inverted Fluorescence Microscope: has a wide assortment of fluorescence filters and objectives allowing high quality image capture of slides/multi-well plates using immunohistochemistry (IHC) or fluorescence readily is achieved. Image analysis software hosted on appropriately powered workstations with cloud connectivity for high capacity storage provided by Dartmouth College: HALO3, Inform, Volocity, AutoDeblur, Image-J / Fiji.

The shared resource also provides state of the art instrumentation for transmission and scanning electron microscopy, housed in the Dartmouth Electron Microscopy Facility (director M. Guinel, PhD). Instrumentation avaiable: (vii) FEI Talos F200i (200kV TEM and STEM electron microscope (TEM), equipped for micro-analysis, and cryo-EM.
(viii) FEI Helios CX5 dual beam FIB-SEM system allowing high resolution electron and ion beam imaging, ion beam milling and automated imaging of biological samples for 3D reconstruction. The system is also equipped with three X-ray microanalysis detectors allowing elemental analysis of the specimens. The facility has instruments for specimen preparation for transmission and scanning electron microscopy including ultramicrotomes (Leica Ultracut UC6 and UC7), critical point dryer (Samdri-970), Leica ACE 600 coater and ThermoFisher Vitrobot..

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

02/27/2024

Biostatistics & Bioinformatics Shared ResourceRRID:SCR_023683

Services:

Computational - Bioinformatics

Computational - Biostatistics

Data Analysis

Data Analysis And Interpretation

Data Processing

Data Processing And Interpretation

Data Visualization

Metagenomics Analysis

Methylation Analysis

Power Analysis

Single-Cell Analysis

Resources:
Contact Info:

Owen Wilkins

Geisel School of Medicine at Dartmouth

1 Medical Center Dr

Lebanon, NH 03756 - United States

https://cancer.dartmouth.edu/scientists-researchers/biostatistics-bioinformatics-shared-resource

Google Maps Location

RRID:

RRID:SCR_023683

Description:

We offer comprehensive statistical and bioinformatic analysis, consultation, collaboration, and technical services.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

06/14/2023

DH Pathology Shared ResourceRRID:SCR_023479

Services:

Assay Development

Clinical Trial Support

Immunohistochemistry

Staining

Tissue Embed

Tissue MicroArray

Whole Slide Imaging

Resources:
Contact Info:

Amber Barrows

One Medical Center Drive

Lebanon, NH 03756 - United States

https://cancer.dartmouth.edu/scientists-researchers/pathology-shared-resource

Google Maps Location

RRID:

RRID:SCR_023479

Description:

Dartmouth-Hitchcock Medical Center / Geisel School of Medicine

This facility provides services outside its institution

This facility does not consult outside its institution

Last updated:

04/18/2023

Trace Element Analysis LaboratoryRRID:SCR_009777

Services:

Mass Spectrometry

Spectroscopy

Resources:
Contact Info:

Brian Jackson

HB 6105 Fairchild Building

Hanover, NH 03755 - United States of America

http://www.dartmouth.edu/~toxmetal/resources/cores/analysis/index.html

Google Maps Location

RRID:

RRID:SCR_009777

Description:

Analysis of elemental composition of biological tissues and fluids by Inductively Coupled Plasma Mass spectrometry. Analysis of Arsenic species in urine and blood by chromatography-ICP-MS. Laser ablation analysis of tissue sections for imaging of elemental distributions.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

04/13/2023

Dartmouth:DartLab (Immune Monitoring and Flow Cytometry Shared Resource)RRID:SCR_019165

Services:

Assay Development

Assays and Measurements

Cell Culture

Cell Sorting

Clinical Research

Clinical Trial Support

Cytokine Assays

Data Analysis

FACS Cell Sorting

Flow Cytometric Analysis

Flow Cytometry Data Analysis

Immune Monitoring

Immunoassay

Luminex Bead Based Cytokine Assays

Luminex Services

Multi-color Flow Cytometry

Spectral Flow Cytometry

Tissue Culture

Resources:

Flow Cytometry

Contact Info:

Dan Mielcarz

710 Rubin Building

Lebanon, NH 03756 - United States of America

www.dartmouth.edu/~dartlab/

Google Maps Location

RRID:

RRID:SCR_019165

Description:

We carry out customized end-point assays using human WB/PBMCs for clinical trials; ELISPOT, multiplex cytokine analysis, cell energy analysis, blood processing and cryopreservation.
We carry out up to 20-color flow cytometry phenotyping and up to 11-color FACS cell subset sorting. We are available for consultation, data analysis, and we offer a 5-lecture Flow Cytometry training course.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

10/13/2022

Mouse Modeling Shared ResourceRRID:SCR_021284

Services:

Animal Husbandry

Cell Culture

Embryo Cryopreservation & Recovery Services

Genotyping

Necropsy

Rederivation (Mouse)

Surgical Services

Tissue Culture

Transgenics

Resources:

Transgenics

Contact Info:

Steve Fiering

1 Medical Center drive

DHMC

Lebanon, NH 03756 - United States of America

https://cancer.dartmouth.edu/scientists-researchers/mouse-modeling

Google Maps Location

RRID:

RRID:SCR_021284

Description:

The mouse modeling supports the generation and utilization of genetically modified mice. We design and produce genetic constructs with the following methods: yeast and E.coli 'recombineering', ES cell targeting (transfection, drug selection, and expansion).

We produce transgenic mice: DNA injections into oocytes, ES cell injections into blastocysts. We also provide humanized immune system mouse models.

In addition we offer start to finish experiment services to assist your many needs, please ask for more info

There are many technician services (animal husbandry, IP and IV injections, blood drawing, necropsy and surgeries- embryo transfers, ovariectomy, vasectomy, tumor removal

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

06/01/2021

DartMouseRRID:SCR_017756

Services:

DNA Analysis

Genotyping

Microarray

Nucleic Acid Extraction

Resources:
Contact Info:

Matthew Ranson

1 Medical Center Drive

610W Borwell, HB 7556

Lebanon, NH 03756 - United States of America

www.dartmouse.org

Google Maps Location

RRID:

RRID:SCR_017756

Description:

DartMouseâ„¢ is a not-for-profit core facility funded by the NIH. The mission of DartMouse is to facilitate the development of congenic mice in support of pre-clinical projects across the U.S. Use of DartMouse allows the generation of congenic mice in 5 generations (~1.5 year), vs. 10 generations (~3 years) required by conventional back-crossing. Investigators fill out our accession form and supply mouse tail clippings - from these DartMouse isolates genomic DNA and performs and analyzes complete genome-wide scans. We return data in graphical and spreadsheet formats, and make specific recommendations on breeder selection. In addition to helping investigators create congenic mice, we also provide a background check service to test the genetic purity of your mice. If there is contaminating genome present, we can then help you back-cross onto your inbred strain of interest. Chips use a 1449 SNP array covering the mouse genome with an average density of < 2 cM. Turnaround time from receipt of samples to results is less than 14 business days. Prices are competitive.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

04/03/2017

Biorepository Core

Services:

BioBanking

Nucleic Acid Extraction

Protocol Development/Clinical Trial Coordination

Resources:
Contact Info:

Tom Palys

1 Medical Center Drive

HD 7927, Rubin 7

Lebanon, NH 03756 - United States of America

http://sites.dartmouth.edu/molecepi/

Google Maps Location

Description:

The Center for Molecular Epidemiology Biorepository Core of the Geisel School of Medicine at Dartmouth utilizes a combination of manual and advanced robotic liquid handing processes, as well as traditional and state-of-the art automated archival storage strategies (e.g. ambient temperature, 4°C, -20°C, -80°C, and liquid nitrogen) to provide standardized services to the to members of the research community. The Biorepository manages a broad range of adult, child and infant specimen types, such as blood and its components, urine, nails, meconium, stool, placenta, breastmilk, DNA and RNA, as well as various environmental samples. Specimen processing services include blood fractionation, lymphocyte isolation, aliquoting of specimens for archival storage, human and microbiome nucleic acid extraction, quantification and normalization, tissue separation and fixation, specimen retrieval, shipping and referral management services. The Biorepository Core also plays a critical role in the development of new projects by working with investigators to pilot and establish methods for collection, processing, archiving and subsequent referral of study specimens. The Biorepository has processed roughly over 21,000 adult and infant specimens and archived over 100,000 aliquots. The Biorepository also manages the Dartmouth Biospecimen Storage Facility, a secure, off-site facility dedicated to long term storage of specimens, providing 24 hour/7 day a week, real-time video surveillance, continuous and redundant monitoring of freezer temperatures and emergency response to users.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

09/02/2016

Dartmouth Molecular Biology Core Facilty

Services:

Copy Number Variation (CNV)

DNA Analysis

Genomics

Genotyping

Mass Spectrometry

Outreach

Real-time qPCR

RNA analysis

Sequencing - Capillary Sequencing

Sequencing - DNA Sequencing

Shared Instrumentation Oversight & Maintenance

Resources:
Contact Info:

Christian Lytle

66 College St, HB 7650, Remsen 243A

Geisel School of Medicine at Dartmouth

Hanover, NH 03755 - United States of America

http://cancer.dartmouth.edu/res/molecular_biology.html

Google Maps Location

Description:

The Dartmouth Molecular Biology Core Facility offers services and support for DNA sequencing and DNA fragment analysis. We have NanoString prep station and digital analyzer, ABI Q-PCR instruments, and other instrumentation for molecular biology applications.

This facility provides services outside its institution

This facility provides consulting outside its institution

Last updated:

03/13/2013

GeoSpatial Resource

Services:

Data Analysis

Resources:
Contact Info:

Heather Carlos

Norris Cotton Cancer Center

One Medical Center Drive

Lebanon, NH 03756 - United States of America

http://cancer.dartmouth.edu/res/geospatial.html

Google Maps Location

Description:

The primary mission of the GeoSpatial Resource is to support the implementation of geospatial analysis for cancer research. Our goal is to provide expert consultation and collaboration for research projects of in behavior, epidemiology, and health services research. The GeoSpatial Resource also strives to educate members of the community in different aspects of geospatial analysis by providing courses through TDI and at Dartmouth College. We can provide assistance with acquisition of spatial data, project design, spatial analysis and mapping.

This facility provides services outside its institution

This facility does not consult outside its institution

Last updated:

03/01/2012

Clinical Pharmacology

Services:

Clinical Assessment (Hematology, Clinical Chemistries, etc.)

Mass Spectrometry

Resources:
Contact Info:

Lionel Lewis

1 Medical Center Drive

Lebanon, NH 03756 - United States of America

http://www.cancer.dartmouth.edu/shared/clin_pharm.shtml

Google Maps Location

Description:

The Clinical Pharmacology Shared Resource operates in the Borwell Research Building at DHMC. In addition, to the biorepository function of our resource we also have bioanalytical hardware and computer hardware and state-of-the-art commercial software programs for application to individual and population-based pharmacokinetic and pharmacodynamic modeling, and modeling drug in vitro and in vivo combination drug effects.

This facility provides services outside its institution

This facility does not consult outside its institution

Last updated:

02/08/2012