Stanford Medicine
Established: 1959
Location: Stanford, United States
Stanford Medicine
Established: 1959
Location: Stanford, United States
15 Core Facilities:
1 Service Outside the Institution
1 Consult Outside the Institution
Biobank
Bioinformatics
Biosafety
Biostatistics
Cancer Center
Cellular Analysis / Cell Line
Genomics / Genome Analysis and Technologies
Imaging (Cell, Molecular, PET, Translational)
Radiochemistry
Stem Cell
Transgenics
Veterinary
Assays and Measurements
Computational - Bioinformatics
Copy Number Variation (CNV)
Cytogenetics
DNA Analysis
Data Analysis
Genomics
Genotyping
Library Services
Microarray
Molecular Library Services
Nucleic Acid Extraction
Optical Imaging
PCR Arrays
Phosphor Imaging
Proteomics
RNA Integrity
RNA analysis
Real-time qPCR
Sequencing - Capillary Sequencing
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)
Shared Instrumentation Oversight & Maintenance
Western Blot
Imaging (Cell, Molecular, PET, Translational)
RRID:SCR_023343
Houses a whole-body PET/MRI scanner. Simultaneous PET/MRI scanner combines high spatial resolution and fine anatomical soft tissue detail of MRI with high molecular specificity of PET imaging. Individual researchers are required to undergo MR safety and radiation safety training.
This facility does not provide services outside its institution
This facility does not consult outside its institution
05/01/2024
Stem Cell
Catherine Carswell-Crumpton
United States of America
RRID:SCR_023385
Core manager provides oversight and training on user-friendly instrumentation so that each investigator is able to perform sorts and analysis on their own.Manager also provides technical help with more complex sorts, ensures that instruments are maintained properly, and will perform troubleshooting as necessary. This novel design will allow for critical stem cell sorts to be done efficiently and economically.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/20/2023
Biostatistics
Manisha Desai,Ying Lu
United States of America
https://med.stanford.edu/cancer/research/shared-resources/biostatistics_research_informatics.html
RRID:SCR_023696
Core provides statistical support to SCI members by engages them on their data related needs. Specifically, BSR members assist researchers at each stage of study’s lifecycle, including project design, mid study evaluation and interpretation and reporting of results. In addition, BSR members mentor SCI investigators in research methods. BSR assists with development and review of proposed studies and planning of research related data management systems.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Radiochemistry
RRID:SCR_023407
Provides clinical and pre-clinical radiotracers for understanding and detecting cancer, cardiac conditions, inflammatory disorders, and neurodegenerative diseases.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Cellular Analysis / Cell Line
RRID:SCR_023403
Provides support and services to clinical investigators including consulting, technology transfer, process and analytical development, clinical manufacturing and regulatory affairs.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
RRID:SCR_023386
Collecting and banking freshly frozen tumor and normal tissue from surgical material and autopsy specimens.Provides fresh tumor tissue for viable cell studies,processes and banks blood from cancer patients,maintains tissue database with links to clinicopathological data,providing histological staining and pathological review,coordinating patient consent and assuring regulatory compliance.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Cancer Center
Brooke Howitt
United States of America
https://med.stanford.edu/cancer/research/shared-resources/tissue-procurement.html
RRID:SCR_023387
Procures and provides needed tissue specimens to Stanford Cancer Institute investigators to support cancer related research. Services include collecting and banking freshly frozen tumor and normal tissue from surgical material and autopsy specimens;Providing fresh tumor tissue for viable cell studies;Processing and banking blood from cancer patients;Maintaining tissue database with links to clinicopathological data;Providing histological staining and pathological review;Coordinating patient consent and assuring regulatory compliance.Provides portal to virtual bank which links inventories of specialized satellite repositories, including collections of hematological and neurosurgical specimens.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Veterinary
RRID:SCR_023388
Provides medical care, in vivo research support, and disease surveillance to laboratory animals at Stanford University . Our board certified and board eligible veterinarians offer consultation in appropriate animal modeling, animal care techniques, experimental methodology, anesthetic techniques, surgical techniques, pain management, humane euthanasia techniques, and animal use (APLAC) protocol consultation. AALAS certified veterinary technicians are available to provide technical support including dosing, biosampling, conducting anesthesia and post-operative care, for example.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Transgenics
RRID:SCR_023382
Services include genome editing of mice, rats and cell lines, mouse line cryopreservation and re-derivation, ES cell targeting, PDX models, drug screening.Crispr Mediated KO/KI and Conditional KO Mice,KI mouse by mouse ES cell genome editing,Integrase Mediated Transgenesis,Conventional Transgenic Mouse,Mouse Line Services,Cell Line Services. Tumor Model Services include In vivo tumor models,In vivo pharmacology,In vitro and biochemical assays,Translational imaging services.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Imaging (Cell, Molecular, PET, Translational)
RRID:SCR_023345
Small animal imaginig service center.Instruments range from systems typically found in clinical setting, but scaled for rodent usage (such as MRI, PET, CT and ultrasound), optical systems for measuring bioluminescence, fluorescence, and Cherenkov light (IVIS, Ami, Lago and Maestro systems), new modalities (MPI and photoacoustic), as well as access to advanced image analysis software, computer workstations, and surgical preparation areas. Scientists are trained to use instruments independently and can schedule studies as needed.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Biobank
RRID:SCR_023346
Provides infrastructure for self service sample management tools, centralized broad consent, standardized laboratory services, and long term sample storage solutions.Tracks biological samples collected in every study at Stanford and linking each with associated electronic health records (i.e., EPIC), REDCap, and molecular data.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Imaging (Cell, Molecular, PET, Translational)
RRID:SCR_023344
Houses four whole-body MRI systems (three 3.0T, one 7.0T). 3T2 and 3T3 are part of the Lucas Service Center. Individual researchers are trained in magnet safety and scanner operations by the magnet manager or MR research technologists.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Biosafety
RRID:SCR_023342
Center consists of Virology BSL3 lab, separate BSL3 Bacteriology lab, and BSL2 lab. It is operated by School of Medicine as scientific service center and is open to all Stanford researchers after adequate training and subsequent use.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Bioinformatics
RRID:SCR_023340
School of Medicine service center operated by Department of Genetics.Set up to facilitate massive scale genomics at Stanford and supports omics, microbiome, sensor, and phenotypic data types.
This facility does not provide services outside its institution
This facility does not consult outside its institution
10/06/2023
Assays and Measurements
Computational - Bioinformatics
Copy Number Variation (CNV)
Cytogenetics
Data Analysis
DNA Analysis
Genomics
Genotyping
Library Services
Microarray
Molecular Library Services
Nucleic Acid Extraction
Optical Imaging
PCR Arrays
Phosphor Imaging
Proteomics
Real-time qPCR
RNA analysis
RNA Integrity
Sequencing - Capillary Sequencing
Sequencing - DNA Sequencing
Sequencing - Next Generation Sequencing (NGS)
Shared Instrumentation Oversight & Maintenance
Western Blot
Genomics / Genome Analysis and Technologies
John Coller
269 Campus Dr
CCSR 0120
Stanford, CA 94305-5177 - United States of America
RRID:SCR_002050
The Stanford Functional Genomics Facility (SFGF) provides high-throughput sequencing (Illumina HiSeq 4000, NextSeq 500, MiSeq and MiniSeq), microarray gene expression and genotyping services (Affymetrix, Agilent and Illumina) to the Stanford research community and outside institutions. The facility also provides 24/7 access to instruments, equipment and software utilized within the genomics field.
This facility provides services outside its institution
This facility provides consulting outside its institution
10/04/2023