University of Miami
Contact Info:
Oncogenomics Core Facility (OCF) General Info
Papanicolaou Cancer Research Building, Room 414
1550 N.W. 10th Avenue
Miami, FL 33136
https://www.sylvester.org/OGSR
Grants and Identifiers:
RRID: RRID:SCR_022502
Other Citation IdentifiersP30CA240139
Instrumentation:
10X Genomics Chromium Plus Genetic Analyzer
Genetic analyzer, referred to as Chromium Controller for combining large partition numbers with a diverse barcode library to generate >100,000 barcode-containing partitions. [Product Link]
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Agilent 2100 Bioanalyzer Instrument
This Bioanalyzer Instrument is used for sample quality control of biomolecules. [Product Link]
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Agilent 5200 Fragment Analyzer System
Fragment Analyzer System allows you to separate 12 samples in parallel in as little as 15 minutes. [Product Link]
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Bio-Rad C-1000 Thermal Cycler
Thermal cycler with a touchscreen interface and dual 48 well reaction module that allows multiple independent protocols to be run simultaneously. [Product Link]
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Bio-Rad CFX96 Real-Time PCR Detection System
The CFX96 Touch System is a real-time PCR detection system that combines optical technology with temperature control. This six-channel (five colors and one FRET channel) real-time PCR instrument combines advanced optical technology with precise temperature control to deliver sensitive, reliable detection for singlexplex or multiplex reactions. Quickly set up runs and monitor amplification traces in real time on the integrated LCD touch screen, or use the included CFX Maestro Software to easily and intuitively design your experiment and analyze results from a connected computer. With up to five-target detection, thermal cycler performance, unrivaled stand-alone functionality, and easy-to-use software, the CFX96 Touch System is designed to advance your qPCR. [Product Link]
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BioTek Synergy H1 Hybrid Multi-Mode Microplate Reader
Configurable multi mode microplate reader. [Product Link]
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Illumina iSeq 100 Sequencing System
Makes next generation sequencing easier. Designed for simplicity, it allows labs of all sizes to sequence DNA and RNA at push of button. [Product Link]
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Illumina NovaSeq 6000 Sequencing System
Unleashes groundbreaking innovations that leverage our technology Now you can get scalable throughput and flexibility for virtually any sequencing method, genome, and scale of project. [Product Link]
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Miltenyi gentleMACS Dissociator Tissue Dissociator
Benchtop instrument for semi automated dissociation of tissues into single cell suspensions or thorough homogenates. Single sample or two samples in parallel can be processed. [Product Link]
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Nanodrop 8000 Spectrophotometer
Microvolume UV Vis spectrophotometer for nucleic acid and protein quantification that can measure multiple samples using 1 to 2 uL of samples. It can analyze spectrum of 220nm to 750nm. [Product Link]
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Perkin Elmer Zephy G3 NGS liquid handler
Benchtop liquid handler designed to automate construction of 48 to 96 next generation sequencing libraries per day. [Product Link]
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Other Equipment
NextSeq 500 Mission Bio Tapestri Nexcelom K2 cell counter Nanostring Max Covaris CryoPrep CP02
Services Provided:
Sequencing - Next Generation Sequencing (NGS)
Relevant Publications:
Description:
The Onco-Genomics Shared Resource (OGSR) provides access to a wide range of technologies and services for the study of the genomics and epigenomics of cancer, in addition to providing technical expertise for project design, trouble-shooting and pre- and post-award support. Principle service areas encompass: 1) next generation sequencing (NGS), 2) single cell genomics 3) Spatial Genomics 4) gene expression assays and molecular quantitation, 5) services for sample extraction and QC.
