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MSKCC-Bioinformatics Core Facility

Memorial Sloan Kettering Cancer Center

Contact Info:

Nicholas D. Socci

417 E 68th Street

New York, NY 10065

https://www.mskcc.org/research/ski/core-facilities/bioinformatics

Grants and Identifiers:

RRID: RRID:SCR_027794

Instrumentation:

Services Provided:

ATACseq

ChIP-Seq

Custom Analysis

GEO/SRA/dbGaP Data Uploads

Machine Learning Methods/AI Methods

MethySeq

Pipeline Deployment

RNAseq (bulk)

ScATACSeq,scDNA_CNV

Scientific Graphics

SgRNA/CRISPR Screens

Shallow WGS For Copy Number

Single Cell RNAseq Analysis

Software Engineering

Spatial Analysis

Training/Teaching

Variant Detection

Relevant Publications:

Description:

The Bioinformatics Core at Memorial Sloan Kettering Cancer Center provides a wide range of computational services to support researchers with varying expertise in computing. Our services include standard bioinformatics pipelines such as variant calling, RNA-Seq, and single-cell RNA-Seq, along with custom analysis workflows for novel data types. We specialize in advanced areas like spatial proteomics, AI-driven analysis, and developing tools like web apps and databases. Additionally, we offer data management, high-quality graphic generation for publications, and comprehensive support for grant writing. The core also provides training and consulting in computational methods and stays updated with the latest Bioinformatics advancements.