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ENPRC Genomics Core

Emory University

Contact Info:

Emma Shippee, Technical Director

954 Gatewood Rd

NSB 5267

Atlanta, GA 30329

https://enprc.emory.edu/nhp_genomics_core/index.html

Grants and Identifiers:

RRID: RRID:SCR_026418

Other Citation Identifiers

1S10OD026799-01

3P51OD011132-62S2

Instrumentation:

Agilent 2100 Bioanalyzer Instrument

This Bioanalyzer Instrument is used for sample quality control of biomolecules. [Product Link]

RRID:SCR_019389

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Agilent 4200 TapeStation System

TapeStation System is used to analyze DNA and RNA samples for quality control. [Product Link]

RRID:SCR_019398

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Agilent 5300 Fragment Analyzer System

Fragment Analyzer System can separate up to 48 or 96 samples in parallel. [Product Link]

RRID:SCR_019411

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Agilent Bravo NGS

Built NGS is used to automate your routine genomics workflows including library prep and enrichment. [Product Link]

RRID:SCR_019473

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Illumina MiSeq System

Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]

RRID:SCR_020134

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Illumina NovaSeq 6000 Sequencing System

Unleashes groundbreaking innovations that leverage our technology Now you can get scalable throughput and flexibility for virtually any sequencing method, genome, and scale of project. [Product Link]

RRID:SCR_020150

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Life Technologies Countess Automated Cell Counter

Automated cell counter that can perform cell counts, viability calculations, hemocytometry, fluorescent protein expression, and measure fluorescence capabilities. There are also reusable slides, fluorescence capabilities, and brightfield fluorescence channels. [Product Link]

RRID:SCR_018591

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Life Technologies QuantStudio 3 Real Time PCR System

Applied Biosystems QuantStudio 3 Real-Time PCR System is designed for users who need an , easy-to-use real-time PCR system that doesn't compromise performance and quality. The simplified Design and Analysis software is best for both first-time and experienced users. When connected to the Thermo Fisher Cloud, the QuantStudio 3 system provides access to your data wherever and whenever you want. Using OptiFlex technology (featuring 4 coupled channels and white LED) and featuring three independent Veriflex temperature zones, the QuantStudio 3 system enables improved data accuracy and sensitivity for a broad range of genomic applications. [Product Link]

RRID:SCR_020238

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Qiagen QIAcube

DNA/RNA Protein Purification System for automated purification of nucleic acids and proteins in molecular biology applications. [Product Link]

RRID:SCR_020414

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10x Genomics Chromium X Controller

10x Genomics Cytassist

LifeTech King Fisher Flex

Services Provided:

10x Genomics

10X Genomics Single Cell

10x Genomics Visium

ATAC-Seq

Bioinformatics Analysis

Consultation

Illumina MiSeq Sequencing

Illumina RNA/DNA NGS Library Construction

Library Services

MiRNA-Seq

Nucleic Acid Extraction

Real-time QPCR

RNA Analysis

RNA Integrity

RNA Isolation

RNA/DNA Quality Control

RNAseq

Sequencing - Next Generation Sequencing (NGS)

Single Cell ATAC-Seq

Single Cell RNA Sequencing

Single Cell RNAseq

Spatial Transcriptomics

Ultra-Low RNA-Seq

Visium HD Spatial Transcriptomics

Relevant Publications:

Description:

The EPC Genomics Core supports your research projects by assisting in experimental design, sample preparation, library prep and sequencing, and data analysis and bioinformatics. Due to our location at the Emory National Primate Research Center, we have developed extensive experience working with non-human primate genomes and other non-standard genomes in addition to the more commonly studied human and mouse genomes. Our close relationship with the Emory Vaccine Center means that we also have significant expertise in the use of transcriptomics and genomics to study immune responses and repertoires. We own an Illumina NovaSeq 6000 (supported by NIH S10 OD026799) and an Illumina MiSeq (supported by the Emory Center for AIDS Research), allowing us to provide rapid support for a wide range of NGS assays. Our website lists a selection of the more commonly run assays at our core, so if you see something that you would like us to help you with or if you have an assay request that you don‘t see listed here please feel free to contact us.