Emory University
Contact Info:
Emma Shippee, Technical Director
954 Gatewood Rd NE
NSB 5267
Atlanta, GA 30329
https://enprc.emory.edu/nhp_genomics_core/index.html
Grants and Identifiers:
RRID: RRID:SCR_026418
Other Citation Identifiers1S10OD026799-01
3P51OD011132-62S2
1S10OD038274-01
Instrumentation:
10X Genomics Chromium X Single Cell Analyzer
Analyzer used for high throughput full range single cell analysis. Chromium X runs high-throughput assays. It runs all single cell assays, including high-throughput assays for Single Cell Immune Profiling and Single Cell Gene Expression. [Product Link]
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10x Genomics Visium CytAssist
Compact, benchtop instrument that enables transfer of transcriptomic probes from standard glass slides to Visium slides, enabling spatial profiling insights to be gained from even more samples. Enables whole transcriptomic spatial profiling insights across entire tissue section, and expanded compatibility with FFPE and/or FF samples. [Product Link]
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10x Genomics Xenium Analyzer
Xenium Analyzer offers subcellular profiling of 100s to 1,000s of RNA targets alongside multiplexed protein, in fresh, frozen or FFPE tissue. [Product Link]
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Agilent 2100 Bioanalyzer Instrument
This Bioanalyzer Instrument is used for sample quality control of biomolecules. [Product Link]
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Agilent 4200 TapeStation System
TapeStation System is used to analyze DNA and RNA samples for quality control. [Product Link]
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Agilent 5300 Fragment Analyzer System
Fragment Analyzer System can separate up to 48 or 96 samples in parallel. [Product Link]
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Agilent Bravo NGS
Built NGS is used to automate your routine genomics workflows including library prep and enrichment. [Product Link]
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Illumina MiSeq System
Access focused applications such as targeted resequencing, metagenomics, small genome sequencing, targeted gene expression profiling, and more. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths. [Product Link]
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Illumina NovaSeq 6000 Sequencing System
Unleashes groundbreaking innovations that leverage our technology Now you can get scalable throughput and flexibility for virtually any sequencing method, genome, and scale of project. [Product Link]
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Illumina NovaSeq X Plus
NovaSeq X Plus Sequencing System has ability to sequence more than 128 genomes per run. Provides faster run times, and the ability to process data directly on the instrument. Uses dual flow cells. Production scale sequencing system can also perform broad range of data intensive applications, from single-cell analysis to exome and circulating tumor DNA sequencing. [Product Link]
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Kingfisher Flex System
Automatic Magnetic Bead Cell Isolation System. Benchtop instrument for the purification and extraction of DNA, RNA, proteins, and cells in laboratory settings. It uses magnetic particle technology to handle medium to high throughput processing of 24 or 96 samples per run, providing a more efficient and consistent alternative to manual methods. [Product Link]
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Life Technologies Countess Automated Cell Counter
Automated cell counter that can perform cell counts, viability calculations, hemocytometry, fluorescent protein expression, and measure fluorescence capabilities. There are also reusable slides, fluorescence capabilities, and brightfield fluorescence channels. [Product Link]
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Life Technologies QuantStudio 3 Real Time PCR System
Applied Biosystems QuantStudio 3 Real-Time PCR System is designed for users who need an , easy-to-use real-time PCR system that doesn't compromise performance and quality. The simplified Design and Analysis software is best for both first-time and experienced users. When connected to the Thermo Fisher Cloud, the QuantStudio 3 system provides access to your data wherever and whenever you want. Using OptiFlex technology (featuring 4 coupled channels and white LED) and featuring three independent Veriflex temperature zones, the QuantStudio 3 system enables improved data accuracy and sensitivity for a broad range of genomic applications. [Product Link]
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Qiagen QIAcube
DNA/RNA Protein Purification System for automated purification of nucleic acids and proteins in molecular biology applications. [Product Link]
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Services Provided:
Illumina RNA/DNA NGS Library Construction
Sequencing - Next Generation Sequencing (NGS)
Visium HD Spatial Transcriptomics
Relevant Publications:
Description:
The EPC Genomics Core supports your research projects by assisting in experimental design, sample preparation, library prep and sequencing, and data analysis and bioinformatics. Due to our location at the Emory National Primate Research Center, we have developed extensive experience working with non-human primate genomes and other non-standard genomes in addition to the more commonly studied human and mouse genomes. Our close relationship with the Emory Vaccine Center means that we also have significant expertise in the use of transcriptomics and genomics to study immune responses and repertoires. We own an Illumina NovaSeq 6000 (supported by NIH S10 OD026799) and an Illumina MiSeq (supported by the Emory Center for AIDS Research), allowing us to provide rapid support for a wide range of NGS assays. Our website lists a selection of the more commonly run assays at our core, so if you see something that you would like us to help you with or if you have an assay request that you don‘t see listed here please feel free to contact us.
