The University of Texas at Austin

Contact Info:

Dhivya Arasappan

102 E. 24th Street FNT 1.206B

Austin, TX 78712

https://research.utexas.edu/cbrs/cores/cbb/

Grants and Identifiers:

RRID: RRID:SCR_022688

Instrumentation:

Services Provided:

Computational - Bioinformatics

Computational - Biostatistics

Computational - High Performance Computing

Consultations

Data Analysis And Interpretation

Data Processing And Interpretation

Data Visualization

Genome/Transcriptome Assembly And Annotation

Genomics

Genotyping-by-sequencing

Metagenomics Analysis

Methylation Analysis

Pipeline Development

R Shiny App Development

RNA analysis

RNAseq

Sequencing - Next Generation Sequencing (NGS)

Single-Cell Analysis

Relevant Publications:

1.) Engels SM, Kamat P, Pafilis GS, Li Y, Agrawal A, Haller DJ, Phillip JM, Contreras LM (2023 Dec 28). Particulate matter composition drives differential molecular and morphological responses in lung epithelial cells PNAS Nexus, 3(1), pgad415. . PMCID: 10754159.

2.) Zhao P, Mondal S, Martin C, DuPlissis A, Chizari S, Ma KY, Maiya R, Messing RO, Jiang N, Ben-Yakar A (2023 Apr). Femtosecond laser microdissection for isolation of regenerating C. elegans neurons for single-cell RNA sequencing. Nature methods, 20(4), 590-599. doi: 10.1038/s41592-023-01804-3. PMID: 36928074.

Description:

The Bioinformatics Consulting Group provides support for students, postdoctoral fellows, and faculty interested in the use of computational approaches to solving biological problems. Our goal is to lower as much as possible the threshold to enter the -omics area of the life sciences.