RRID:SCR_025135 | Gainesville, FL 32611 | Rheology, Contact Angle Measurement, 3D Visualization, Annealing Furnace, Atomic Layer Deposition, Computed Tomography (CT), Differential Interference Contrast Microscopy, Dynamic Light Scattering, Electron Beam Lithography, Electron Microscopy, Electronic Medical Device Prototyping, Ellipsometry, Etching, Focused Ion Beam (FIB), FT-IR, Light Scattering, Lyophilization, MicroCT, Microscopy, Microstructure Characterization, Zeta Potential, X-ray Diffraction and Scattering, Wire Bonding, Wafer Dicing, Wafer Bonding, UV-Vis Spectroscopy, Transmission Electron Microscopy, Surface Roughness, Spectroscopy, Scanning Electron Microscopy, Raman Spectroscopy, EDS - Energy Dispersive X-ray Spectrometry | 03/19/2024 |
RRID:SCR_025083 | Gainesville, FL 32610 | Phenotyping | 03/05/2024 |
RRID:SCR_019147 | Gainesville, FL 32610 | Monoclonal Antibody, Cloning, Consultations, ELISA, Cell Fusion, Cell Culture, Immunization, Western Blot, Protein Extraction/Purification, Fabrication, Tissue Culture, Reagents, Biolayer Interferometry (BLI), Bioshipping, Capillary Electrophoresis, Cell Imaging, Consultation, Data Analysis, Luminex Bead Based Cytokine Assays, Live Cell Imaging, Immunoassay, Immunofluorescence , Fluorescence Spectroscopy, Plate Reader, Project Management, SDS-PAGE, Polyclonal Antibody Production | 07/13/2023 |
RRID:SCR_023324 | Jupiter, FL 33458 | 03/03/2023 | |
RRID:SCR_023048 | Jupiter, FL 33458 | Amino Acid Analysis, Clinical Trial Support, Computational - Biostatistics, Computational - Bioinformatics, Computational - High Performance Computing, Consultation, Consultations, Mass Spectrometry, Mass Spectrometry - Proteins And Peptides, Data Analysis, Data Analysis And Interpretation, Data Processing, Data Processing And Interpretation, Data Visualization, Quantitative Proteomics - TMT, RNA Modification Analysis, Metagenomics Analysis, Methylation Analysis, TMT-Quantitation, Experimental Design, Training, Power Analysis, RNA analysis, Proteomics Analysis, Quantitative Phosphoproteomics | 02/28/2023 |
RRID:SCR_019146 | Gainesville, FL 32610 | Confocal Microscopy, Cryo-Electron Microscopy, Electron Microscopy, Microscopy, Transmission Electron Microscopy, Immuno Electron Microscopy, High-Pressure Freezing, Scanning Electron Microscopy, Sample Preparation | 07/07/2022 |
RRID:SCR_019152 | Gainesville, FL 32610 | Sequencing - Next Generation Sequencing (NGS), 10x Genomics, Sequencing - DNA Sequencing, Library Services, RNA analysis, RNAseq, Metagenomics Analysis, DNA Analysis | 10/05/2021 |
RRID:SCR_019145 | Gainesville, FL 32610 | Genomics, Genotyping, Molecular Library Services, Real-time qPCR, 10x Genomics, Digital PCR, Droplet Digital PCR, Antibody Sequencing, Library Services, Consultations, Data Analysis, CRISPR Rosa26 & CRISPR H11, CRISPR/Cas Project Design, ELISA, RNAseq, RNA analysis, RNA Isolation, RNA Integrity, DNA Analysis, PCR Arrays, Reagents, Genome/Transcriptome Assembly And Annotation, Gene Expression Arrays, Single-Cell Analysis, Single-cell Sequencing, Protein Extraction/Purification | 03/05/2021 |
RRID:SCR_019120 | Gainesville, FL 32610 | Computational - Bioinformatics, Computational - Biostatistics, Computational - High Performance Computing, Data Analysis, Genomics, Consultations, Genome/Transcriptome Assembly And Annotation, Metagenomics Analysis, Quantitative DNA Sequence Mapping, Single-Cell Analysis | 11/10/2020 |
RRID:SCR_019151 | Gainesville, FL 32610 | Mass Spectrometry, Proteomics, Sequencing - Protein Sequencing, 2D Spectra Acquisition and Interpretation, Quantitative DNA Sequence Mapping, Protein Extraction/Purification, Luminex Services, Reagents, Consultations | 11/05/2020 |
RRID:SCR_019119 | Gainesville, FL 32610 | Confocal Microscopy, Flow Cytometric Analysis, Imaging Flow Cytometry, Histology, Cell Sorting, Analysis Workstations, In-vivo Imaging | 10/23/2020 |
Gainesville, FL 32610 | 10x Genomics, Amino Acid Analysis, Cell Culture, Cell Imaging, Cell Sorting, Clinical Imaging - Small Animal (X-ray, Ultrasound, microCAT, MRI), Computational - Bioinformatics, Confocal Microscopy, Copy Number Variation (CNV), CRISPR/Cas Project Design, Cryo-Electron Microscopy, Data Analysis, DNA Analysis, Droplet Digital PCR, Electron Microscopy, Flow Cytometric Analysis, Genomics, Genotyping, Library Services, Mass Spectrometry, Microarray, Microbiome, Microscopy, Monoclonal Antibody, Multiphoton Microscopy, Nucleic Acid Extraction, Pathway Interpretation, PCR Arrays, Phosphoproteomics, Protein Extraction/Purification, Proteomics, Real-time qPCR, RNA analysis, RNA Integrity, Sequencing - DNA Sequencing, Sequencing - Next Generation Sequencing (NGS), Single-cell Sequencing, Western Blot | 10/23/2020 |
University of Florida
2033 Mowry Road
CGRC 191
Gainesville, FL 32610
United States of Americahttp://www.biotech.ufl.edu/bioinformatics/cite this facility
Edith "Angel" Sampson
Last Updated: 11/10/2020
The Bioinformatics core offers bioinformatics consulting and data analysis services to help researchers analyze and understand the large data sets acquired from next generation sequencing and array-based technologies. We coordinate closely with other ICBR cores (Next-Gen Sequencing, Gene Expression, Cytometry, and Proteomics) on shared projects.
We collaborate with researchers in designing experiments and analyzing complex datasets by applying various data-analytical and theoretical methods, mathematical modeling and computational techniques. We develop and operate comprehensive pipelines enabling large-scale data processing, including NGS data analysis (e.g., RNA-Seq, DNA-Seq, methyl-Seq and ChIP-Seq,) single-cell analysis, transcriptome and genome annotation (project-based EST/genomic sequence assembly, annotation and gene prediction,) microarray-based data analysis (statistical and functional data analysis from major microarray platforms,) variant detection and metagenomics (characterization of microbial communities.)
Bioinformatics staff members have extensive experience in bioinformatics, genomics, transcriptomics and translational informatics in plant, animal and microbial systems. Our expertise includes big data analysis, statistical analysis, software development and high-performance computing. We strive to be scientific collaborators – rather than just service providers – using our expertise and skills to ensure the success of your projects.
Our services are offered at a standard hourly rate, and can be accessed on a fee-for-service basis or as long-term collaborations.
Services are offerred outside of University of Florida
Consulting is offerred outside of University of Florida
