The CoreMarketplace: VT-Mass Spectrometry Incubator

Genomics Sequencing Center (Genomics / Genome Analysis and Technologies) RRID:SCR_017958	Virginia Tech Blacksburg, VA 24061-0477	DNA Analysis, Genomics, Genotyping, Microbiome, Real-time qPCR, RNA analysis, RNA Integrity, Sequencing - Capillary Sequencing, Sequencing - DNA Sequencing, Sequencing - Next Generation Sequencing (NGS)	Last Updated: 06/12/2023
VT-Mass Spectrometry Incubator (Mass Spectrometry) RRID:SCR_017956	Virginia Tech Blacksburg, VA 24061	Mass Spectrometry, Metabolomics, Metabolomics Platform, Phosphoproteomics, Proteomics, SDS-PAGE, Untargeted Mass Spectrometry	Last Updated: 04/25/2022
Data Analysis Core	Virginia Tech Blacksburg, VA 24061-0477	Computational - Application Development, Computational - Bioinformatics, Computational - Biostatistics, Computational - High Performance Computing, Copy Number Variation (CNV), Data Analysis	Last Updated: 07/02/2018

All Facilities >> Virginia Tech >> VT-Mass Spectrometry Incubator (Mass Spectrometry)

VT-Mass Spectrometry Incubator (Mass Spectrometry)

Facility Details

About This Facility

Services and Equipment

Publications

Awards & Associations

Metadata

Other Facilities at this Institution:

Data Analysis Core

Genomics Sequencing Center

Virginia Tech

Steger Hall

1015 LIfe Science Circle

Blacksburg, VA 24061

United States of America

https://www.biochem.vt.edu/research/VTmassspec.html

cite this facility

Quicklinks:

https://coremarketplace.org/VT-MSI https://coremarketplace.org/RRID:SCR_017956

Primary Contact:

Rich Helm

Last Updated: 04/25/2022

Facility RRID

RRID:SCR_017956

Facility Details

Targeted and untargeted metabolomics and proteomics resources

Facility Policies

Services are offerred outside of Virginia Tech

Consulting is offerred outside of Virginia Tech

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Services offered:

Mass Spectrometry

Metabolomics

Metabolomics Platform

Phosphoproteomics

Proteomics

SDS-PAGE

Untargeted Mass Spectrometry

Facility Equipment

ThermoFisher Orbitrap Fusion Lumos with ETD, interfaced with and EASY nLC1200

Waters SynaptG2-S, Acquity I-Class UPLC, Triversa Nanomate, ESI and APCI sources

ABSciex 4800 MALDI TOF/TOF

Shimadzu LCMS8060, Nexera LC30 UPLC

Shimadzu LCMS9030, NexeraLC40

(To see more facility information, click the in the upper right)

Publications

Publications associated with this facility (Click To View):

1.) DeHart TG, Kushelman MR, Hildreth SB, Helm RF, Jutras BL (2021 Dec). The unusual cell wall of the Lyme disease spirochaete Borrelia burgdorferi is shaped by a tick sugar. Nature microbiology, 6(12), 1583-1592. doi: 10.1038/s41564-021-01003-w. ID: 34819646.

2.) Galligan TM, Helm RF, Case BF, Bodinof Jachowski CM, Frazier CL, Alaasam V, Hopkins WA (2021 Nov 1). Pre-breeding androgen and glucocorticoid profiles in the eastern hellbender salamander (Cryptobranchus alleganiensis alleganiensis). General and comparative endocrinology, 313(), 113899. . ID: 34499909.

3.) Land ES, Cridland CA, Craige B, Dye A, Hildreth SB, Helm RF, Gillaspy GE, Perera IY (2021 Sep 4). A Role for Inositol Pyrophosphates in the Metabolic Adaptations to Low Phosphate in Arabidopsis. Metabolites, 11(9), . . ID: 34564416.

4.) Baaziz H, Compton KK, Hildreth SB, Helm RF, Scharf BE (2021 Aug 9). McpT, a Broad-Range Carboxylate Chemoreceptor in Sinorhizobium meliloti. Journal of bacteriology, 203(17), e0021621. doi: 10.1128/JB.00216-21. ID: 34124939.

5.) Martin K, Musaus M, Navabpour S, Gustin A, Ray WK, Helm RF, Jarome TJ (2021 Aug). Females, but not males, require protein degradation in the hippocampus for contextual fear memory formation. Learning & memory (Cold Spring Harbor, N.Y.), 28(8), 248-253. . ID: 34266989.

6.) Musaus M, Farrell K, Navabpour S, Ray WK, Helm RF, Jarome TJ (2021). Sex-Specific Linear Polyubiquitination Is a Critical Regulator of Contextual Fear Memory Formation. Frontiers in behavioral neuroscience, 15(), 709392. doi: 10.3389/fnbeh.2021.709392. ID: 34305548.

7.) Schneider GF, Salazar D, Hildreth SB, Helm RF, Whitehead SR (2021). Comparative Metabolomics of Fruits and Leaves in a Hyperdiverse Lineage Suggests Fruits Are a Key Incubator of Phytochemical Diversification. Frontiers in plant science, 12(), 693739. doi: 10.3389/fpls.2021.693739. ID: 34527005.

8.) Farrell K, Musaus M, Navabpour S, Martin K, Ray WK, Helm RF, Jarome TJ (2021). Proteomic Analysis Reveals Sex-Specific Protein Degradation Targets in the Amygdala During Fear Memory Formation. Frontiers in molecular neuroscience, 14(), 716284. doi: 10.3389/fnmol.2021.716284. ID: 34658783.

9.) Arapov TD, Saldaña RC, Sebastian AL, Ray WK, Helm RF, Scharf BE (2020 Jun 25). Cellular Stoichiometry of Chemotaxis Proteins in Sinorhizobium meliloti. Journal of bacteriology, 202(14), . . ID: 32393521.

10.) Hildreth SB, Foley EE, Muday GK, Helm RF, Winkel BSJ (2020 Jan 20). The dynamic response of the Arabidopsis root metabolome to auxin and ethylene is not predicted by changes in the transcriptome. Scientific reports, 10(1), 679. doi: 10.1038/s41598-019-57161-9. ID: 31959762.

11.) Hopkins WA, DuRant SE, Beck ML, Ray WK, Helm RF, Romero LM (2020 Jan 1). Cortisol is the predominant glucocorticoid in the giant paedomorphic hellbender salamander (Cryptobranchus alleganiensis). General and comparative endocrinology, 285(), 113267. . ID: 31491375.

12.) Compton KK, Hildreth SB, Helm RF, Scharf BE (2020). An Updated Perspective on Sinorhizobium meliloti Chemotaxis to Alfalfa Flavonoids. Frontiers in microbiology, 11(), 581482. doi: 10.3389/fmicb.2020.581482. ID: 33193213.

13.) Elahi R, Ray WK, Dapper C, Dalal S, Helm RF, Klemba M (2019 Nov 26). Functional annotation of serine hydrolases in the asexual erythrocytic stage of Plasmodium falciparum. Scientific reports, 9(1), 17532. doi: 10.1038/s41598-019-54009-0. ID: 31772212.

14.) Liu L, Yi J, Ray WK, Vu LT, Helm RF, Siegel PB, Cline MA, Gilbert ER (2019 Apr 1). Fasting differentially alters the hypothalamic proteome of chickens from lines with the propensity to be anorexic or obese. Nutrition & diabetes, 9(1), 13. doi: 10.1038/s41387-019-0081-1. ID: 30931934.

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Associations

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Metadata

Links

All the links listed resolve to this core profile

https://coremarketplace.org/?FacilityID=990
https://coremarketplace.org/RRID:SCR_017956

Institution

Institution ROR ID: https://ror.org/02smfhw86

SciCrunch Data Imports (data maintained by https://scicrunch.org)

Keywords:

Mass, spectrometry, incubator, education, training, sample, preparation, instrument, operation, data, analysis, metadata, metabolomics, proteomics, service, core, ABRF, USEDit

VT-Mass Spectrometry Incubator (Mass Spectrometry)

Quicklinks:

Primary Contact:

Facility RRID

Facility Details

Facility Policies

(To see more facility information, click the in the upper right)

Services offered:

Facility Equipment

(To see more facility information, click the in the upper right)

Publications

(To see more facility information, click the in the upper right)

Associations

(To see more facility information, click the in the upper right)

Metadata

SciCrunch Data Imports (data maintained by https://scicrunch.org)

(To see more facility information, click the in the upper right)

Contact Rich Helm

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VT-Mass Spectrometry Incubator

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